RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SPATA31D4Q6ZUB0 917 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 USP49Q70CQ1 688 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 GPR149Q86SP6 731 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 HSCBQ8IWL3 235 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 HASPINQ8TF76 798 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 HDAC7Q8WUI4 952 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 KCNN1Q92952 543 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 UROC1Q96N76 676 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 PPP1R10Q96QC0 940 aaKnown RBP8.12□□□□□ -1.11
NUP88-205ENST00000572809 USP28Q96RU2 1077 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 TTPALQ9BTX7 342 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 PANK2Q9BZ23 570 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 ZHX3Q9H4I2 956 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 POMKQ9H5K3 350 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 SFXN1Q9H9B4 322 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 PARVGQ9HBI0 331 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 C11orf16Q9NQ32 467 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 SLC38A7Q9NVC3 462 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 SERTAD1Q9UHV2 236 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 MUTYHQ9UIF7 546 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 CDH22Q9UJ99 828 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 TBX20Q9UMR3 447 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 NR2E1Q9Y466 385 aa8.12□□□□□ -1.11
NUP88-205ENST00000572809 CCDC195A0A1B0GUA6 201 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 PRR33A8MZF0 331 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 TRAPPC3O43617 180 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 LILRA1O75019 489 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 B3GAT3O94766 335 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 KIF4AO95239 1232 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 MYBP10242 640 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 HARSP12081 509 aaKnown RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 RPL17P18621 184 aaKnown RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 SP100P23497 879 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 IGFBP6P24592 240 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 TXLNAP40222 546 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 ZNF131P52739 623 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 CREMQ03060 361 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 MCL1Q07820 350 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 UPP1Q16831 310 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 SLC10A6Q3KNW5 377 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 SEZ6Q53EL9 994 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 RTP2Q5QGT7 225 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 FOXD4L5Q5VV16 416 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 LILRA6Q6PI73 481 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 PRSS55Q6UWB4 352 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 C15orf39Q6ZRI6 1047 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 SV2BQ7L1I2 683 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 DYMQ7RTS9 669 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 GLYCTKQ8IVS8 523 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 GALNT6Q8NCL4 622 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 LNX1Q8TBB1 728 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 PIK3R5Q8WYR1 880 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 EDAQ92838 391 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 BICD1Q96G01 975 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 ZNF396Q96N95 335 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 ZMAT2Q96NC0 199 aaKnown RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 PLEKHA4Q9H4M7 779 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 GOLGA2P5Q9HBQ8 144 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 MAN1C1Q9NR34 630 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 ANKFY1Q9P2R3 1169 aa8.11□□□□□ -1.11
NUP88-205ENST00000572809 MORC2Q9Y6X9 1032 aaPredicted RBP8.11□□□□□ -1.11
NUP88-205ENST00000572809 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 C2CD4DB7Z1M9 353 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 TMEM189-UBE2V1I3L0A0 370 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 K7ENM7 598 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 TGM5O43548 720 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 PPP6R2O75170 966 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 TBCAO75347 108 aaKnown RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 PROCP04070 461 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CLTAP09496 248 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 KCNE1P15382 129 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 NMT1P30419 496 aaKnown RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 RPL9P32969 192 aaKnown RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 ABCD1P33897 745 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 SCNN1AP37088 669 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 BRCC3P46736 316 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 NASPP49321 788 aaPredicted RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 LIG4P49917 911 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 ZXDAP98168 799 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 GTF2BQ00403 316 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 SOX4Q06945 474 aaPredicted RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 NOLC1Q14978 699 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP88-205ENST00000572809 STK38Q15208 465 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 PSMD5Q16401 504 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 KYAT1Q16773 422 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CD300LGQ6UXG3 332 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CYP26C1Q6V0L0 522 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
NUP88-205ENST00000572809 CCDC73Q6ZRK6 1079 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 ZNF720Q7Z2F6 126 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 LINC00301Q8NCQ3 95 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 KREMEN2Q8NCW0 462 aa8.1□□□□□ -1.11
NUP88-205ENST00000572809 CMASQ8NFW8 434 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms