RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 NOC2LQ9Y3T9 749 aaKnown RBP6.55□□□□□ -1.36
TRAPPC1-204ENST00000571947 CDY2AQ9Y6F7 541 aa6.55□□□□□ -1.36
TRAPPC1-204ENST00000571947 MYO16Q9Y6X6 1858 aa6.55□□□□□ -1.36
TRAPPC1-204ENST00000571947 TET1Q8NFU7 2136 aa6.55□□□□□ -1.36
TRAPPC1-204ENST00000571947 GRIN2DO15399 1336 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 TTC3P53804 2025 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 MIF4GDA9UHW6 222 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 KCNK3O14649 394 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 DDX3YO15523 660 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 MED7O43513 233 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 FKTNO75072 461 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CABYRO75952 493 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 LSM8O95777 96 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 TUBBP07437 444 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CFHP08603 1231 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 KCNE1P15382 129 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CD58P19256 250 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CDH5P33151 784 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 NSFP46459 744 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 RAP1GAPP47736 663 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 VEGFBP49765 207 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 GUCY2FP51841 1108 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 RAD23BP54727 409 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CDH8P55286 799 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 PRMT2P55345 433 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 C2orf54Q08AI8 447 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 INCA1Q0VD86 236 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 MYO1EQ12965 1108 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 PTP4A2Q12974 167 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ARHGEF6Q15052 776 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 BRD3Q15059 726 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 WDR72Q3MJ13 1102 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 LIN9Q5TKA1 542 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 FBXO38Q6PIJ6 1188 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 SCARA5Q6ZMJ2 495 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 MON1BQ7L1V2 547 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 RNF180Q86T96 592 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 TMEM130Q8N3G9 435 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 LRRC52Q8N7C0 313 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 TMEM35BQ8NCS4 154 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 SPATA4Q8NEY3 305 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 BEST2Q8NFU1 509 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ZNF564Q8TBZ8 553 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 RAET1EQ8TD07 263 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ACTRT1Q8TDG2 376 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 WHAMMQ8TF30 809 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CPA5Q8WXQ8 436 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 WNT8BQ93098 351 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 MS4A14Q96JA4 679 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ZMAT2Q96NC0 199 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 PSMB7Q99436 277 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ZSWIM1Q9BR11 485 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 TSEN34Q9BSV6 310 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 PARD6BQ9BYG5 372 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ZNF518BQ9C0D4 1074 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 SENP6Q9GZR1 1112 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 WNT8AQ9H1J5 351 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CXCL16Q9H2A7 254 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 EPC1Q9H2F5 836 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 NXF3Q9H4D5 531 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 SMYD3Q9H7B4 428 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 CHST12Q9NRB3 414 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ARGLU1Q9NWB6 273 aaPredicted RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 RAB21Q9UL25 225 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 UBQLN1Q9UMX0 589 aaKnown RBP6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 HES2Q9Y543 173 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 ALG6Q9Y672 507 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 VWA8A3KMH1 1905 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 GREB1Q4ZG55 1949 aa6.54□□□□□ -1.36
TRAPPC1-204ENST00000571947 FAM170AA1A519 330 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TARSL2A2RTX5 802 aaKnown RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CCDC151A5D8V7 595 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PIRO00625 290 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ATMINO43313 823 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CEP104O60308 925 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CILPO75339 1184 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 RPS6KA5O75582 802 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CD4P01730 458 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CHRNA1P02708 482 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CALB1P05937 261 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 RHOXF2BP0C7M4 288 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 VDRP11473 427 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CYP3A5P20815 502 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 MMP8P22894 467 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 RRM1P23921 792 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 AKAP5P24588 427 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 CTNNA2P26232 953 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 SSTR3P32745 418 aaPredicted RBP6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 DNA2P51530 1060 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ACLYP53396 1101 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 TNNC1P63316 161 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PTK7Q13308 1070 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ITGA7Q13683 1181 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 MESDQ14696 234 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 PTGISQ16647 500 aa6.53□□□□□ -1.36
TRAPPC1-204ENST00000571947 ZNF394Q53GI3 561 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms