RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 SDCBP2Q9H190 292 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 CRISPLD1Q9H336 500 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 MMRN2Q9H8L6 949 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.2
SMG6-209ENST00000571442 MAN1C1Q9NR34 630 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 HOOK1Q9UJC3 728 aaKnown RBP7.53□□□□□ -1.2
SMG6-209ENST00000571442 ITGA11Q9UKX5 1188 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 L1RE1Q9UN81 338 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 BACE2Q9Y5Z0 518 aa7.53□□□□□ -1.2
SMG6-209ENST00000571442 KPNA7A9QM74 516 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PSMA7O14818 248 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 MAPK13O15264 365 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 OAZ2O95190 189 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 KIF20AO95235 890 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 GLUD1P00367 558 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TNNC2P02585 160 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CYP11A1P05108 521 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TYMPP19971 482 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 ACAT1P24752 427 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 PSMC2P35998 433 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 RAP1GAPP47736 663 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 GCLMP48507 274 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 VAMP7P51809 220 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 ARPP19P56211 112 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 NLRP12P59046 1061 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 RBP5P82980 135 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 LRRC63Q05C16 580 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PAK1Q13153 545 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 RAB33AQ14088 237 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 SURF1Q15526 300 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 SOWAHAQ2M3V2 549 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 ZACNQ401N2 412 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CTXN3Q4LDR2 81 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CBWD6Q4V339 395 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CBWD3Q5JTY5 395 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CBWD5Q5RIA9 395 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 RARS2Q5T160 578 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 POTEHQ6S545 545 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TMC5Q6UXY8 1006 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 RNF19BQ6ZMZ0 732 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 C11orf57Q6ZUT1 292 aaPredicted RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 ANKS3Q6ZW76 656 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 IRF2BP1Q8IU81 584 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PDCL2Q8N4E4 241 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TTC9BQ8N6N2 239 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 LRRC52Q8N7C0 313 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 SMRP1Q8NCR6 262 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TAS1R2Q8TE23 839 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CACTINQ8WUQ7 758 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 KBTBD7Q8WVZ9 684 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 SUSD6Q92537 303 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CASP10Q92851 521 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 ZNF707Q96C28 371 aaPredicted RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 HPDLQ96IR7 371 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PGLYRP2Q96PD5 576 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PKMYT1Q99640 499 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 MRPL45Q9BRJ2 306 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 EMILIN2Q9BXX0 1053 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 APOBEC3GQ9HC16 384 aaKnown RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 CD320Q9NPF0 282 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 TMLHEQ9NVH6 421 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 CD207Q9UJ71 328 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 FBXW11Q9UKB1 542 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 COG5Q9UP83 839 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 FRMD4BQ9Y2L6 1034 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 USP15Q9Y4E8 981 aaPredicted RBP7.52□□□□□ -1.21
SMG6-209ENST00000571442 SNX9Q9Y5X1 595 aa7.52□□□□□ -1.21
SMG6-209ENST00000571442 PTPRDP23468 1912 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 GABRDO14764 452 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 CETN3O15182 167 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 TRAPPC3O43617 180 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 ATP2C2O75185 946 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 SOAT2O75908 522 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 ABLIM3O94929 683 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 HLA-DRAP01903 254 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 ADH1AP07327 375 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 ODC1P11926 461 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 LMO2P25791 158 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 RPL13P26373 211 aaKnown RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 CDH8P55286 799 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 FKBP3Q00688 224 aaKnown RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 YWHAHQ04917 246 aaPredicted RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 SMAD4Q13485 552 aaKnown RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 BIRC3Q13489 604 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 NCOA4Q13772 614 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 SV2CQ496J9 727 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 OVOS1Q6IE37 1185 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 PTCRAQ6ISU1 281 aaPredicted RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 ZNF280DQ6N043 979 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 INTS8Q75QN2 995 aaKnown RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 FILIP1Q7Z7B0 1213 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 KREMEN2Q8NCW0 462 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 PPP2R3CQ969Q6 453 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 SLC35C1Q96A29 364 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 TSG101Q99816 390 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
SMG6-209ENST00000571442 SRRTQ9BXP5 876 aaKnown RBP7.51□□□□□ -1.21
SMG6-209ENST00000571442 ZCWPW1Q9H0M4 648 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms