RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 DDX11L8A8MPP1 907 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 ZNF213O14771 459 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 MICAL2O94851 1124 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 MYL4P12829 197 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 HNRNPLP14866 589 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD3-213ENST00000571249 P2RY2P41231 377 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 NT5C2P49902 561 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 CDC42EP1Q00587 391 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 ELOAQ14241 798 aaKnown RBP7.71□□□□□ -1.18
CHD3-213ENST00000571249 MCMDC2Q4G0Z9 681 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 CENPQQ7L2Z9 268 aaPredicted RBP7.71□□□□□ -1.18
CHD3-213ENST00000571249 RTL10Q7L3V2 364 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 RASSF3Q86WH2 238 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 ARID3BQ8IVW6 561 aaPredicted RBP7.71□□□□□ -1.18
CHD3-213ENST00000571249 SMG8Q8ND04 991 aaKnown RBP7.71□□□□□ -1.18
CHD3-213ENST00000571249 CEP76Q8TAP6 659 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 PRR7Q8TB68 274 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 NXPE2Q96DL1 559 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 FAM227BQ96M60 508 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 BTBD3Q9Y2F9 522 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 HES2Q9Y543 173 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 CDY1Q9Y6F8 540 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 SF3B1O75533 1304 aaKnown RBP eCLIP7.71□□□□□ -1.18
CHD3-213ENST00000571249 NID2Q14112 1375 aa7.71□□□□□ -1.18
CHD3-213ENST00000571249 ARHGEF37A1IGU5 675 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 RCCD1A6NED2 376 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 E9PAM4 449 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 MEIS1O00470 390 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 SEC24AO95486 1093 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 LRG1P02750 347 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 SYPP08247 313 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 HOXA11P31270 313 aaPredicted RBP7.7□□□□□ -1.18
CHD3-213ENST00000571249 PRSS12P56730 875 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 PSMD2Q13200 908 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 SEC23AQ15436 765 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 MAP7D1Q3KQU3 841 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 ITPRIPL2Q3MIP1 535 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 ARHGAP29Q52LW3 1261 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 CEP55Q53EZ4 464 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 CYP4A22Q5TCH4 519 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 TRIM68Q6AZZ1 485 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 DNAJC14Q6Y2X3 702 aaPredicted RBP7.7□□□□□ -1.18
CHD3-213ENST00000571249 ZNF589Q86UQ0 364 aaPredicted RBP7.7□□□□□ -1.18
CHD3-213ENST00000571249 ERICH1Q86X53 443 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 KSR1Q8IVT5 923 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 PIP4P2Q8N4L2 257 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 GSTCDQ8NEC7 633 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 PI4K2BQ8TCG2 481 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 E2F7Q96AV8 911 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 FAM167AQ96KS9 214 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 CNOT6LQ96LI5 555 aaKnown RBP7.7□□□□□ -1.18
CHD3-213ENST00000571249 DRC1Q96MC2 740 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 PI4K2AQ9BTU6 479 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHD3-213ENST00000571249 LRRC4CQ9HCJ2 640 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 NRBP2Q9NSY0 501 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 AGPAT5Q9NUQ2 364 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 CEP72Q9P209 647 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 PTPRDP23468 1912 aa7.7□□□□□ -1.18
CHD3-213ENST00000571249 A0A0D9SFI3 127 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 ATP9BO43861 1147 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 BRINP1O60477 761 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 PSAPP07602 524 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 JUPP14923 745 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 TCF3P15923 654 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 ZNF16P17020 682 aaPredicted RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 TMPRSS3P57727 454 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 TLE1Q04724 770 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 SPIRE1Q08AE8 756 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 HSP90AA2PQ14568 343 aaPredicted RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 IGFBP7Q16270 282 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 C6orf118Q5T5N4 469 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 HAUS6Q7Z4H7 955 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 ZNF410Q86VK4 478 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 CCDC33Q8N5R6 958 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 CNNM3Q8NE01 707 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 NANOS1Q8WY41 292 aaKnown RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 RRP36Q96EU6 259 aaKnown RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 NLRP4Q96MN2 994 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 EIF2AQ9BY44 585 aaKnown RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 HPS4Q9NQG7 708 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 GKN1Q9NS71 199 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 SUCLA2Q9P2R7 463 aaPredicted RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 PLEKHB1Q9UF11 243 aaPredicted RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 SEPT3Q9UH03 358 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
CHD3-213ENST00000571249 IPPQ9Y573 584 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 TTC41PQ6P2S7 1318 aa7.69□□□□□ -1.18
CHD3-213ENST00000571249 A0A1W2PRU2 124 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 PRRG1O14668 218 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 KIF4AO95239 1232 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 TNFRSF8P28908 595 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 HOXD12P35452 270 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 GRIK2Q13002 908 aa7.68□□□□□ -1.18
CHD3-213ENST00000571249 TARDBPQ13148 414 aaKnown RBP eCLIP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms