RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CALML4Q96GE6 196 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 BORCS6Q96GS4 357 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 SENP8Q96LD8 212 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 TSPAN18Q96SJ8 248 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 MKNK1Q9BUB5 465 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 MSTO1Q9BUK6 570 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 CHRDQ9H2X0 955 aa19.06■□□□□ 0.64
CIITA-206ENST00000571190 GPR179Q6PRD1 2367 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 A0A1W2PRU2 124 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 ANO9A1A5B4 782 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 PIRO00625 290 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 SOAT2O75908 522 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 NFICP08651 508 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 SCP2P22307 547 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 MYBPC2Q14324 1141 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 ZC2HC1CQ53FD0 456 aaPredicted RBP19.05■□□□□ 0.64
CIITA-206ENST00000571190 C9orf57Q5W0N0 161 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 GAREM2Q75VX8 874 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 OR10T2Q8NGX3 314 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 ATRIPQ8WXE1 791 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 FAM3CQ92520 227 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 FAM212AQ96EL1 285 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 LRRC3BQ96PB8 259 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 HINFPQ9BQA5 517 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 IKZF4Q9H2S9 585 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 SMC3Q9UQE7 1217 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 PIAS3Q9Y6X2 628 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 MYH15Q9Y2K3 1946 aa19.05■□□□□ 0.64
CIITA-206ENST00000571190 EP300Q09472 2414 aaPredicted RBP19.05■□□□□ 0.64
CIITA-206ENST00000571190 ZNF263O14978 683 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 XPOTO43592 962 aaKnown RBP19.04■□□□□ 0.64
CIITA-206ENST00000571190 LONP1P36776 959 aaKnown RBP19.04■□□□□ 0.64
CIITA-206ENST00000571190 EPHB3P54753 998 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 GAS6Q14393 721 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 WDR44Q5JSH3 913 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
CIITA-206ENST00000571190 GPIHBP1Q8IV16 184 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 GPR88Q9GZN0 384 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 EPC1Q9H2F5 836 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 LMAN1LQ9HAT1 526 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 DLL3Q9NYJ7 618 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 STYXL1Q9Y6J8 313 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 SPTBN4Q9H254 2564 aa19.04■□□□□ 0.64
CIITA-206ENST00000571190 CYP11A1P05108 521 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 CHRNB1P11230 501 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 ACOT2P49753 483 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 FCHO2Q0JRZ9 810 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 PLD1Q13393 1074 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 SF3A1Q15459 793 aaKnown RBP19.03■□□□□ 0.64
CIITA-206ENST00000571190 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 DNAJB7Q7Z6W7 309 aaPredicted RBP19.03■□□□□ 0.64
CIITA-206ENST00000571190 ARID3BQ8IVW6 561 aaPredicted RBP19.03■□□□□ 0.64
CIITA-206ENST00000571190 CD302Q8IX05 232 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 PSMG2Q969U7 264 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 ZHX3Q9H4I2 956 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 SLITRK6Q9H5Y7 841 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 DERAQ9Y315 318 aa19.03■□□□□ 0.64
CIITA-206ENST00000571190 MED19A0JLT2 244 aaPredicted RBP19.02■□□□□ 0.64
CIITA-206ENST00000571190 ODC1P11926 461 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 CCNE1P24864 410 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 DDIT3P35638 169 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 ALDH1A3P47895 512 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 CDR1P51861 262 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 TMEM132DQ14C87 1099 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 CRELD2Q6UXH1 353 aaPredicted RBP19.02■□□□□ 0.64
CIITA-206ENST00000571190 LARP4BQ92615 738 aaKnown RBP19.02■□□□□ 0.64
CIITA-206ENST00000571190 E2F7Q96AV8 911 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 EPSTI1Q96J88 318 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 CCSER1Q9C0I3 900 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 ST6GALNAC4Q9H4F1 302 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 SMG5Q9UPR3 1016 aaKnown RBP19.02■□□□□ 0.64
CIITA-206ENST00000571190 ASB3Q9Y575 518 aa19.02■□□□□ 0.64
CIITA-206ENST00000571190 ZNF292O60281 2723 aa19.02■□□□□ 0.63
CIITA-206ENST00000571190 CACNA1IQ9P0X4 2223 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 OTOGLQ3ZCN5 2332 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 CHADO15335 359 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 BMP15O95972 392 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 KRT18P05783 430 aaKnown RBP19.01■□□□□ 0.63
CIITA-206ENST00000571190 TGM1P22735 817 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 PAX3P23760 479 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 ADSSP30520 456 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 SOX9P48436 509 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 MLLT6P55198 1093 aaPredicted RBP19.01■□□□□ 0.63
CIITA-206ENST00000571190 PUM1Q14671 1186 aaKnown RBP eCLIP19.01■□□□□ 0.63
CIITA-206ENST00000571190 BRAPQ7Z569 592 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 LRRTM3Q86VH5 581 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 LPIN3Q9BQK8 851 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 STRA6Q9BX79 667 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 FAM126AQ9BYI3 521 aaPredicted RBP19.01■□□□□ 0.63
CIITA-206ENST00000571190 ASB7Q9H672 318 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 IL21Q9HBE4 155 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 HSFX1Q9UBD0 423 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 C2CD2Q9Y426 696 aa19.01■□□□□ 0.63
CIITA-206ENST00000571190 TBCAO75347 108 aaKnown RBP19■□□□□ 0.63
CIITA-206ENST00000571190 PPP1R37O75864 691 aa19■□□□□ 0.63
CIITA-206ENST00000571190 ATF6P18850 670 aa19■□□□□ 0.63
CIITA-206ENST00000571190 GABRR2P28476 465 aa19■□□□□ 0.63
CIITA-206ENST00000571190 MCM2P49736 904 aa19■□□□□ 0.63
CIITA-206ENST00000571190 PTPAQ15257 358 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms