RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SPTBN2O15020 2390 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 TPRP12270 2363 aaKnown RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 ACACBO00763 2458 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 MYBPHLA2RUH7 354 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 SFI1A8K8P3 1242 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 SPECC1L-ADORA2AF8WAN1 911 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 K7ESF4 209 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 DPYSL4O14531 572 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 XPOTO43592 962 aaKnown RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 VNN2O95498 520 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 CLTAP09496 248 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 MAPTP10636 758 aaKnown RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 PLS3P13797 630 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 CTHP32929 405 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 AARSP49588 968 aaKnown RBP eCLIP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 DMWDQ09019 674 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 MYBPC2Q14324 1141 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 ARHGAP29Q52LW3 1261 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 DSTYKQ6XUX3 929 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 SYNPOQ8N3V7 929 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 TMEM161BQ8NDZ6 487 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 DDX1Q92499 740 aaKnown RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 KIF12Q96FN5 646 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 DNAJC25Q9H1X3 360 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 RBM12Q9NTZ6 932 aaKnown RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 OBP2AQ9NY56 170 aa20.66■□□□□ 0.9
SCARF1-204ENST00000570902 TIMM13Q9Y5L4 95 aaPredicted RBP20.66■□□□□ 0.9
SCARF1-204ENST00000570902 TTC26A0AVF1 554 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 PP2D1A8MPX8 630 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 H0YCG3 227 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 HOXA6P31267 233 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 PRPHP41219 470 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 SOX9P48436 509 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 PPP2R3AQ06190 1150 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 KYAT1Q16773 422 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 ARHGAP15Q53QZ3 475 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 CENPPQ6IPU0 288 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 DTHD1Q6ZMT9 781 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 ITIH5Q86UX2 942 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 KCTD17Q8N5Z5 321 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 TSPAN18Q96SJ8 248 aa20.65■□□□□ 0.9
SCARF1-204ENST00000570902 TYMPP19971 482 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 U2AF2P26368 475 aaKnown RBP eCLIP20.64■□□□□ 0.89
SCARF1-204ENST00000570902 PLCB2Q00722 1185 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 SPAG1Q07617 926 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 SRSF5Q13243 272 aaKnown RBP20.64■□□□□ 0.89
SCARF1-204ENST00000570902 ZBTB6Q15916 424 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 ST3GAL2Q16842 350 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 HEATR6Q6AI08 1181 aaKnown RBP20.64■□□□□ 0.89
SCARF1-204ENST00000570902 OVOS1Q6IE37 1185 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 ARMCX5Q6P1M9 558 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 Q6ZS52 159 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 CEP68Q76N32 757 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 KCNK18Q7Z418 384 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 DNAJB7Q7Z6W7 309 aaPredicted RBP20.64■□□□□ 0.89
SCARF1-204ENST00000570902 PSMG2Q969U7 264 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 BICD1Q96G01 975 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 CRISPLD1Q9H336 500 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 ATXN3LQ9H3M9 355 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 KCND2Q9NZV8 630 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 HSFX1Q9UBD0 423 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 PCDHB6Q9Y5E3 794 aa20.64■□□□□ 0.89
SCARF1-204ENST00000570902 PAX3P23760 479 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 CDC25AP30304 524 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 TOB1P50616 345 aaPredicted RBP20.63■□□□□ 0.89
SCARF1-204ENST00000570902 RAD51AP2Q09MP3 1159 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 STXBP5Q5T5C0 1151 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 TXNDC11Q6PKC3 985 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 WDR5BQ86VZ2 330 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 FAM160A2Q8N612 972 aaPredicted RBP20.63■□□□□ 0.89
SCARF1-204ENST00000570902 GTSE1Q9NYZ3 720 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 SLC27A5Q9Y2P5 690 aa20.63■□□□□ 0.89
SCARF1-204ENST00000570902 MTMR11A4FU01 709 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 ODC1P11926 461 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 GABRR2P28476 465 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 WEE1P30291 646 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 CCINQ13939 588 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 PON2Q15165 354 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 PTPAQ15257 358 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 ZRSR1Q15695 479 aaKnown RBP20.62■□□□□ 0.89
SCARF1-204ENST00000570902 GPR158Q5T848 1215 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 GAREM2Q75VX8 874 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 SYT2Q8N9I0 419 aaPredicted RBP20.62■□□□□ 0.89
SCARF1-204ENST00000570902 ATAD1Q8NBU5 361 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 MMTAG2Q9BU76 263 aaKnown RBP20.62■□□□□ 0.89
SCARF1-204ENST00000570902 MKNK1Q9BUB5 465 aa20.62■□□□□ 0.89
SCARF1-204ENST00000570902 LARSQ9P2J5 1176 aaKnown RBP20.62■□□□□ 0.89
SCARF1-204ENST00000570902 SEC24BO95487 1268 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 SCP2P22307 547 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 IL17AQ16552 155 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 WDR44Q5JSH3 913 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 HYIQ5T013 277 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 IL31Q6EBC2 164 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 GPIHBP1Q8IV16 184 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 TTC8Q8TAM2 541 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 BPIFB1Q8TDL5 484 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
SCARF1-204ENST00000570902 ZFYVE19Q96K21 471 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms