RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PDZD7Q9H5P4 517 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 PTPRHQ9HD43 1115 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 XPNPEP3Q9NQH7 507 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 PCDHGC3Q9UN70 934 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 AGAP1Q9UPQ3 857 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CNTN6Q9UQ52 1028 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CAPN6Q9Y6Q1 641 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 MOXD2PA6NHM9 499 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ZNF263O14978 683 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 SART1O43290 800 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 TSPAN1O60635 241 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 HSF2BPO75031 334 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 NPTXRO95502 500 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 KRT7P08729 469 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 RHOXF2BP0C7M4 288 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ARF4P18085 180 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 CTNNA2P26232 953 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CYP2C19P33261 490 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 SMC1AQ14683 1233 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 MESDQ14696 234 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 WDR72Q3MJ13 1102 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 SLFN11Q7Z7L1 901 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TRAPPC12Q8WVT3 735 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 DDX27Q96GQ7 796 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 KREMEN1Q96MU8 473 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 RHOXF2Q9BQY4 288 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 UPF3AQ9H1J1 476 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 BCAS3Q9H6U6 928 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CISHQ9NSE2 258 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 STIM2Q9P246 746 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 BARX2Q9UMQ3 279 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 KBTBD13C9JR72 458 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 HAS3O00219 553 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TAF6P49848 677 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 COPS2P61201 443 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 OSTNP61366 133 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 C1orf220Q5T0J3 134 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CRYBG3Q68DQ2 2970 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 MAP7D3Q8IWC1 876 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TTC13Q8NBP0 860 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 LNX1Q8TBB1 728 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 PARD6BQ9BYG5 372 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 VIPAS39Q9H9C1 493 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 MED4Q9NPJ6 270 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CYLDQ9NQC7 956 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CREBZFQ9NS37 354 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TRIM10Q9UDY6 481 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ANAPC7Q9UJX3 599 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 NOCTQ9UK39 431 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 RAB21Q9UL25 225 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TMEM110-MUSTN1A8MSY1 372 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 LACTBL1A8MY62 500 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 ZBTB42B2RXF5 422 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 PEX10O60683 326 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 PARNO95453 639 aaKnown RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 ERBB2P04626 1255 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 CXCL8P10145 99 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 ITGA4P13612 1032 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 CST5P28325 142 aaPredicted RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 RBM10P98175 930 aaKnown RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 NAA35Q5VZE5 725 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 NOP9Q86U38 636 aaKnown RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 RPAINQ86UA6 219 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 MCOLN2Q8IZK6 566 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 PXYLP1Q8TE99 480 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 SEMA4DQ92854 862 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 TATDN2Q93075 761 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 POP1Q99575 1024 aaKnown RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 CFHR5Q9BXR6 569 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 PRDM16Q9HAZ2 1276 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 V9GYY5 206 aaPredicted RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 ITGB3P05106 788 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 TNFRSF8P28908 595 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 FLT3LGP49771 235 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 MYL6P60660 151 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 FMO1Q01740 532 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 CALCOCO2Q13137 446 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 CRELD2Q6UXH1 353 aaPredicted RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 SLC47A2Q86VL8 602 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 SESTD1Q86VW0 696 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 C18orf8Q96DM3 657 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 CAPNS2Q96L46 248 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.38
CYLD-216ENST00000569891 UROC1Q96N76 676 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 TLR10Q9BXR5 811 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 ASNSD1Q9NWL6 643 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 DSEQ9UL01 958 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 UMODL1Q5DID0 1318 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 KAT6AQ92794 2004 aa6.4□□□□□ -1.38
CYLD-216ENST00000569891 MMEP08473 750 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 H2AFXP16104 143 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 DNA2P51530 1060 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 NKX3-2P78367 333 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 CAV1Q03135 178 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 HLTFQ14527 1009 aaKnown RBP eCLIP6.4□□□□□ -1.39
CYLD-216ENST00000569891 ZNF268Q14587 947 aaPredicted RBP6.4□□□□□ -1.39
CYLD-216ENST00000569891 KIZQ2M2Z5 673 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 LRRC38Q5VT99 294 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 NT5DC3Q86UY8 548 aa6.4□□□□□ -1.39
CYLD-216ENST00000569891 TMEM86AQ8N2M4 240 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms