RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 CCL23P55773 120 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 GTF2BQ00403 316 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 POU5F1BQ06416 359 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 MGAT3Q09327 533 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 KCNA1Q09470 495 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 STRN3Q13033 797 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 POU4F3Q15319 338 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 MAPK6Q16659 721 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 DPCR1Q3MIW9 517 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 CDCA2Q69YH5 1023 aaPredicted RBP8.47□□□□□ -1.05
SMG1-214ENST00000568038 KLHL10Q6JEL2 608 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 LRRC8DQ7L1W4 858 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 C7orf61Q8IZ16 206 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 MYOCDQ8IZQ8 938 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 SYCP3Q8IZU3 236 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 SLC17A8Q8NDX2 589 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 SCFD1Q8WVM8 642 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 SCLYQ96I15 445 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 ACCSQ96QU6 501 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 HTATIP2Q9BUP3 242 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 OSBPL7Q9BZF2 842 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 IKZF4Q9H2S9 585 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 RAD18Q9NS91 495 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 TBX21Q9UL17 535 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 TBX20Q9UMR3 447 aa8.47□□□□□ -1.05
SMG1-214ENST00000568038 NOC2LQ9Y3T9 749 aaKnown RBP8.47□□□□□ -1.05
SMG1-214ENST00000568038 CENPFP49454 3210 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 TRIM43BA6NCK2 446 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 EIF3DO15371 548 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMG1-214ENST00000568038 B4GALT5O43286 388 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 RPS6KA5O75582 802 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 ERLIN2O94905 339 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 CTSBP07858 339 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 IQCF3P0C7M6 154 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 CCDC192P0DO97 292 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 EIF4BP23588 611 aaKnown RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 HOXD13P35453 343 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 STX17P56962 302 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 SOX4Q06945 474 aaPredicted RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 RBL2Q08999 1139 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 STIM1Q13586 685 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 ALCAMQ13740 583 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 STX1AQ16623 288 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 FBXO47Q5MNV8 452 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 KIAA0319Q5VV43 1072 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 CATSPER4Q7RTX7 472 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 ADSSL1Q8N142 457 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 MLKLQ8NB16 471 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 C2CD4AQ8NCU7 369 aaPredicted RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 ZNF507Q8TCN5 953 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 DPF3Q92784 378 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 TRIM43Q96BQ3 446 aaPredicted RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 BICD1Q96G01 975 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 CPB2Q96IY4 423 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 TARS2Q9BW92 718 aaKnown RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 STRA6Q9BX79 667 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 NFKBIZQ9BYH8 718 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 GTPBP4Q9BZE4 634 aaKnown RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 CCDC113Q9H0I3 377 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 FZD8Q9H461 694 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 ST6GALNAC4Q9H4F1 302 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 AGO3Q9H9G7 860 aaKnown RBP8.46□□□□□ -1.06
SMG1-214ENST00000568038 ANO10Q9NW15 660 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 PRKAG2Q9UGJ0 569 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 EXOC7Q9UPT5 735 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 CTNND2Q9UQB3 1225 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 PHLPP2Q6ZVD8 1323 aa8.46□□□□□ -1.06
SMG1-214ENST00000568038 KIAA1324LA8MWY0 1029 aaPredicted RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 TISP43B9A030 160 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 ANKRD63C9JTQ0 380 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 ACKR2O00590 384 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 PSMA7O14818 248 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 KIAA0355O15063 1070 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 GPR182O15218 404 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 NBNO60934 754 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 KIF20AO95235 890 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 CYP11A1P05108 521 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 EDN1P05305 212 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 RAG1P15918 1043 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 SYN1P17600 705 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 SFPQP23246 707 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMG1-214ENST00000568038 ITGB8P26012 769 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 CD52P31358 61 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 MATR3P43243 847 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMG1-214ENST00000568038 LIG4P49917 911 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 PAK2Q13177 524 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 PRPF4BQ13523 1007 aaKnown RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 LPIN1Q14693 890 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 FAM187BQ17R55 369 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 KNOP1Q1ED39 458 aaKnown RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 PAOXQ6QHF9 649 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 TSHZ1Q6ZSZ6 1077 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 C11orf57Q6ZUT1 292 aaPredicted RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 DEFB128Q7Z7B8 93 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 FAM228AQ86W67 206 aa8.45□□□□□ -1.06
SMG1-214ENST00000568038 CDR2LQ86X02 465 aaPredicted RBP8.45□□□□□ -1.06
SMG1-214ENST00000568038 SHISA5Q8N114 240 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms