RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TNFAIP2Q03169 654 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 DAW1Q8N136 415 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 SIX2Q9NPC8 291 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 DDX56Q9NY93 547 aaKnown RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 MYH10P35580 1976 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 MYH8P13535 1937 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 STAT4Q14765 748 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 TMEM132BQ14DG7 1078 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 ABRAQ8N0Z2 381 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 SHC3Q92529 594 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 ACAP3Q96P50 834 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 TMEM121Q9BTD3 319 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 COG5Q9UP83 839 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 OPLAHO14841 1288 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 TBC1D12O60347 775 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 RBP3P10745 1247 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 CDH8P55286 799 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 PIGHQ14442 188 aaPredicted RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 ATP13A4Q4VNC1 1196 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 PRUNE1Q86TP1 453 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 LRRC57Q8N9N7 239 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 SLC13A1Q9BZW2 595 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 CYP39A1Q9NYL5 469 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 N4BP2Q86UW6 1770 aaPredicted RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 PPFIBP2Q8ND30 876 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 SPATA18Q8TC71 538 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 ASAP3Q8TDY4 903 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 CGRRF1Q99675 332 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 NEUROG2Q9H2A3 272 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 PNMA3Q9UL41 463 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 TPX2Q9ULW0 747 aaKnown RBP12.22□□□□□ -0.45
CDH1-210ENST00000566612 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 LCP1P13796 627 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 ROR1Q01973 937 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 GCNT1Q02742 428 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 ICE2Q659A1 982 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 SYDE1Q6ZW31 735 aaPredicted RBP12.21□□□□□ -0.45
CDH1-210ENST00000566612 CCDC33Q8N5R6 958 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 FAM71DQ8N9W8 422 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 BSNDQ8WZ55 320 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 MAML1Q92585 1016 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 RAB3IPQ96QF0 476 aaPredicted RBP12.21□□□□□ -0.45
CDH1-210ENST00000566612 RAB6BQ9NRW1 208 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 ZC3H11AO75152 810 aaKnown RBP eCLIP12.21□□□□□ -0.45
CDH1-210ENST00000566612 EGFRP00533 1210 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 APRTP07741 180 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 SLC8A1P32418 973 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 PWWP2AQ96N64 755 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 SPATC1LQ9H0A9 340 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 ETNK1Q9HBU6 452 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 CHMP2BQ9UQN3 213 aa12.21□□□□□ -0.45
CDH1-210ENST00000566612 TCRBV7S2A1N4TA0A589 114 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 CIB2O75838 187 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 CXCL8P10145 99 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 LAMTOR4Q0VGL1 99 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 TMEM132DQ14C87 1099 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 AMHR2Q16671 573 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 TWF2Q6IBS0 349 aaKnown RBP12.21□□□□□ -0.46
CDH1-210ENST00000566612 SIX6OS1Q8N1H7 587 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 MSL3Q8N5Y2 521 aaKnown RBP12.21□□□□□ -0.46
CDH1-210ENST00000566612 ATP11CQ8NB49 1132 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 OR5B17Q8NGF7 314 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 KLC2Q9H0B6 622 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 C10orf88Q9H8K7 445 aa12.21□□□□□ -0.46
CDH1-210ENST00000566612 ITGB4P16144 1822 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 IQANK1A0A1B0GTG1 560 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 H0Y3Z8 333 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 MAPK13O15264 365 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 KCNN4O15554 427 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 XPOTO43592 962 aaKnown RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 CREB3O43889 395 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 VTNP04004 478 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 JAM2P57087 298 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 TGFB2P61812 414 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 GLRA4Q5JXX5 417 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 FAXCQ5TGI0 409 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 SPATA21Q7Z572 469 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 TEX2Q8IWB9 1127 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 CLEC4DQ8WXI8 215 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 HPDLQ96IR7 371 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 AP5M1Q9H0R1 490 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 IRS2Q9Y4H2 1338 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 GLRA2P23416 452 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.2□□□□□ -0.46
CDH1-210ENST00000566612 PCGF5Q86SE9 256 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 CPNE8Q86YQ8 564 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 KIF2BQ8N4N8 673 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 MICAL1Q8TDZ2 1067 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 CDKL2Q92772 493 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 F8VP50 259 aa12.2□□□□□ -0.46
CDH1-210ENST00000566612 COPEO14579 308 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms