RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SEC24CP53992 1094 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 NRG3P56975 720 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SNX16P57768 344 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 TEKQ02763 1124 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 EGR3Q06889 387 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SNAPC2Q13487 334 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CUL4AQ13619 759 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CHRNA2Q15822 529 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FLYWCH1Q4VC44 716 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC9C2Q5TAH2 1124 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 TMEM132EQ6IEE7 984 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 BORAQ6PGQ7 559 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC22A25Q6T423 547 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 BRINP3Q76B58 766 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FAM214BQ7L5A3 538 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 NKAIN3Q8N8D7 197 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FBXO18Q8NFZ0 1043 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SPPL3Q8TCT6 385 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 RSAD2Q8WXG1 361 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CLEC4DQ8WXI8 215 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 MAML1Q92585 1016 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 GOLGA1Q92805 767 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FCRL2Q96LA5 508 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 HSPA12BQ96MM6 686 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 C7orf26Q96N11 449 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 JMJD8Q96S16 334 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 FOXB1Q99853 325 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 BAG1Q99933 345 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 TREX2Q9BQ50 279 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 C1orf43Q9BWL3 253 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 AGXT2Q9BYV1 514 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 GHITMQ9H3K2 345 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ELAC1Q9H777 363 aaKnown RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 ASH2LQ9UBL3 628 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CFDP1Q9UEE9 299 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SCOCQ9UIL1 159 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 PCDHGB4Q9UN71 923 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 CNPY2Q9Y2B0 182 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 SIT1Q9Y3P8 196 aa3.75□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A0G2JLL6 359 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 A0A1W2PQJ5 194 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM43BA6NCK2 446 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM64A6NGJ6 449 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM64BA6NI03 449 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TMEM233B4DJY2 109 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 BTN3A1O00481 513 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 SPTLC2O15270 562 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 SGTAO43765 313 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 RASSF9O75901 435 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 MTA2O94776 668 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ACTL6BO94805 426 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ARIH2O95376 493 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HSPA4LO95757 839 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ITGA5P08648 1049 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ECHS1P30084 290 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 AKT1P31749 480 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 STAT5AP42229 794 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 AARSP49588 968 aaKnown RBP eCLIP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 FLT3LGP49771 235 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 CCR5P51681 352 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 EPHA5P54756 1037 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ADAM9Q13443 819 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ASIC2Q16515 512 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 SLC44A4Q53GD3 710 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 KIAA1614Q5VZ46 1190 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TANGO2Q6ICL3 276 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ACAD10Q6JQN1 1059 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 LRSAM1Q6UWE0 723 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 FAM180AQ6UWF9 173 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 CATSPERGQ6ZRH7 1159 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 KANSL1Q7Z3B3 1105 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 DNAJB7Q7Z6W7 309 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 VSIG1Q86XK7 387 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 GALNT13Q8IUC8 556 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HERC6Q8IVU3 1022 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 OTUD7AQ8TE49 926 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 RFFLQ8WZ73 363 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM43Q96BQ3 446 aaPredicted RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 NMD3Q96D46 503 aaKnown RBP3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 VMP1Q96GC9 406 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HIST1H2AHQ96KK5 128 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ASB2Q96Q27 587 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 DMRTA2Q96SC8 542 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 YME1L1Q96TA2 773 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 HIST1H2AJQ99878 128 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 PDCD2LQ9BRP1 358 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 MXD3Q9BW11 206 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 TRIM54Q9BYV2 358 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 WDCPQ9H6R7 721 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ACAD9Q9H845 621 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 MANSC1Q9H8J5 431 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 GRPEL1Q9HAV7 217 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 KCNK12Q9HB15 430 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 RXFP1Q9HBX9 757 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 CD248Q9HCU0 757 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ATP13A1Q9HD20 1204 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 INCENPQ9NQS7 918 aa3.74□□□□□ -1.81
HERPUD1-211ENST00000566550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms