RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 MICALL1Q8N3F8 863 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 RNF10Q8N5U6 811 aaKnown RBP10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 OR5B17Q8NGF7 314 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 BCAS4Q8TDM0 211 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 SEMA4DQ92854 862 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 EIF2AQ9BY44 585 aaKnown RBP10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 UBE2TQ9NPD8 197 aaPredicted RBP10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 C1orf112Q9NSG2 853 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 DMGDHQ9UI17 866 aaKnown RBP10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 PADI3Q9ULW8 664 aa10.07□□□□□ -0.8
CNEP1R1-206ENST00000565556 VNN1O95497 513 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 CD4P01730 458 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 GHRP10912 638 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 SKIP12755 728 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 FERP16591 822 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 USP8P40818 1118 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 MAGEA1P43355 309 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 GJA8P48165 433 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 RAB27AP51159 221 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 GCNT1Q02742 428 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 TRPC3Q13507 836 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 NCOA4Q13772 614 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 LPIN1Q14693 890 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 DRAP1Q14919 205 aaPredicted RBP10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 ASIC2Q16515 512 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 SGSM1Q2NKQ1 1148 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 C1orf53Q5VUE5 145 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 JADE1Q6IE81 842 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 SLC39A5Q6ZMH5 540 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 TAF4BQ92750 862 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 SNX27Q96L92 541 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 TRAIPQ9BWF2 469 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 MTMR12Q9C0I1 747 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 SNTG2Q9NY99 539 aa10.06□□□□□ -0.8
CNEP1R1-206ENST00000565556 GRID2IPA4D2P6 1211 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 DCDC2CA8MYV0 355 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ANKRD65E5RJM6 399 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 F8VZ95 297 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 RBAK-RBAKDNI3L0D1 243 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 XPOTO43592 962 aaKnown RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 RECQL4O94761 1208 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 SELPP16109 830 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TBXAS1P24557 533 aaPredicted RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ANXA13P27216 316 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 CD52P31358 61 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 SOX5P35711 763 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 KLHL30Q0D2K2 578 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TTMPQ5BVD1 217 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ALKAL1Q6UXT8 129 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ANKRD33Q7Z3H0 272 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ARHGEF19Q8IW93 802 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 PPM1KQ8N3J5 372 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 MREGQ8N565 214 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TSEN2Q8NCE0 465 aaKnown RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 KIF12Q96FN5 646 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 FAXDC2Q96IV6 333 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TOX2Q96NM4 488 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TLR10Q9BXR5 811 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 NXF3Q9H4D5 531 aaKnown RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 AGO3Q9H9G7 860 aaKnown RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 ITGA11Q9UKX5 1188 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 IPPQ9Y573 584 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 TRIP11Q15643 1979 aa10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 PDCD11Q14690 1871 aaKnown RBP10.05□□□□□ -0.8
CNEP1R1-206ENST00000565556 KIAA0754O94854 1291 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ASS1P00966 412 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 NFICP08651 508 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 KCNE1P15382 129 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ATICP31939 592 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PRKCIP41743 596 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 LIG3P49916 1009 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 DSC3Q14574 896 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 ARHGAP44Q17R89 818 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 XKR4Q5GH76 650 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 TRAF7Q6Q0C0 670 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 KDM7AQ6ZMT4 941 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 IRF2BP2Q7Z5L9 587 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 SMG8Q8ND04 991 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 C1orf131Q8NDD1 294 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 HELQQ8TDG4 1101 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 WHAMMQ8TF30 809 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 TMEM106CQ9BVX2 250 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 GDF3Q9NR23 364 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 RBM12Q9NTZ6 932 aaKnown RBP10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 FAM105AQ9NUU6 356 aa10.04□□□□□ -0.8
CNEP1R1-206ENST00000565556 PARP2Q9UGN5 583 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms