RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 USP17L6PQ6QN14 398 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 TMC5Q6UXY8 1006 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 LRRC55Q6ZSA7 311 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 CDH24Q86UP0 819 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 CDHR1Q96JP9 859 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 FAM84AQ96KN4 292 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 ZNF558Q96NG5 402 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 KCNK12Q9HB15 430 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 C1orf112Q9NSG2 853 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 TMEM161AQ9NX61 479 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 FAM53CQ9NYF3 392 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 SPG21Q9NZD8 308 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 TJP2Q9UDY2 1190 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 FRMPD4Q14CM0 1322 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 KDM3AQ9Y4C1 1321 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 NBEAQ8NFP9 2946 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 FRYQ5TBA9 3013 aa5.88□□□□□ -1.47
TUBGCP4-209ENST00000564511 SPTBN2O15020 2390 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 ANKRD33BA6NCL7 494 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 NT5C1B-RDH14C9J2C7 533 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 CYTH3O43739 400 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 NARSO43776 548 aaKnown RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 EPCAMP16422 314 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 TFE3P19532 575 aaPredicted RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 KLRC1P26715 233 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 PDE1AP54750 535 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 FAM189BP81408 668 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 TNK2Q07912 1038 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 MTMR1Q13613 665 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 BMS1Q14692 1282 aaKnown RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 IMMTQ16891 758 aaKnown RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 SLC35G1Q2M3R5 365 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 ODR4Q5SWX8 454 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 MEI1Q5TIA1 1274 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 ANKRD45Q5TZF3 282 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 MTHFD1LQ6UB35 978 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 FAM43BQ6ZT52 329 aaPredicted RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 OTOP3Q7RTS5 596 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 THAP5Q7Z6K1 395 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 CABP7Q86V35 215 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 RNF169Q8NCN4 708 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 CUL5Q93034 780 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 UBE2FQ969M7 185 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 RILPL2Q969X0 211 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 CASD1Q96PB1 797 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 PPP1R16BQ96T49 567 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 PCYT2Q99447 389 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 KRT23Q9C075 422 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 TMEM117Q9H0C3 514 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 ELAC1Q9H777 363 aaKnown RBP5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 DUSP12Q9UNI6 340 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 KIAA1671Q9BY89 1806 aa5.87□□□□□ -1.47
TUBGCP4-209ENST00000564511 SALL3Q9BXA9 1300 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 MEIS2O14770 477 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 PGRP06401 933 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 CENPBP07199 599 aaPredicted RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 DCNP07585 359 aaKnown RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 GLI1P08151 1106 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SP9P0CG40 484 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 ZSCAN20P17040 1043 aaPredicted RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SDHBP21912 280 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 GDNFP39905 211 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 ALDH7A1P49419 539 aaKnown RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 METAP2P50579 478 aaKnown RBP eCLIP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 STAT5BP51692 787 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 ATXN1P54253 815 aaKnown RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 GRM4Q14833 912 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SEC23AQ15436 765 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 KIZQ2M2Z5 673 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 ZNF746Q6NUN9 644 aaPredicted RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 CCDC149Q6ZUS6 474 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 PLPPR4Q7Z2D5 763 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 GPR149Q86SP6 731 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 TICAM2Q86XR7 235 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 C1orf210Q8IVY1 113 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 KIAA0319LQ8IZA0 1049 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 VPS52Q8N1B4 723 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SLC39A11Q8N1S5 342 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 LRRC43Q8N309 656 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 FEZF2Q8TBJ5 459 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 AUTS2Q8WXX7 1259 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 TMEM169Q96HH4 297 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 KIRREL1Q96J84 757 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SLC38A3Q99624 504 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 DPH2Q9BQC3 489 aaPredicted RBP5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 MIR1-1HGQ9H1L0 117 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 TBC1D17Q9HA65 648 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 IGSF9Q9P2J2 1179 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 NCDNQ9UBB6 729 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 WNT16Q9UBV4 365 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 SLC9A2Q9UBY0 812 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 RCAN3Q9UKA8 241 aa5.86□□□□□ -1.47
TUBGCP4-209ENST00000564511 CA14Q9ULX7 337 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms