RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CLSTN2Q9H4D0 955 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 ZDHHC7Q9NXF8 308 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 DSEQ9UL01 958 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 MAFFQ9ULX9 164 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 FRMD4BQ9Y2L6 1034 aa18.65■□□□□ 0.58
USB1-209ENST00000564387 LRRIQ3A6PVS8 624 aaPredicted RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 CYB561D2O14569 222 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 STAU1O95793 577 aaKnown RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 CST3P01034 146 aaPredicted RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 TNNI1P19237 187 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 PSMC2P35998 433 aaKnown RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 ROR1Q01973 937 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 UVSSAQ2YD98 709 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 ANKRD40Q6AI12 368 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 INTS8Q75QN2 995 aaKnown RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 GLYCTKQ8IVS8 523 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 C12orf76Q8N812 135 aaPredicted RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 SPATA18Q8TC71 538 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 ADAMTS19Q8TE59 1207 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 TIMM13Q9Y5L4 95 aaPredicted RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 MUC3AQ02505 3323 aa18.64■□□□□ 0.57
USB1-209ENST00000564387 TCF20Q9UGU0 1960 aaKnown RBP18.64■□□□□ 0.57
USB1-209ENST00000564387 TTC28Q96AY4 2481 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 WDR27A2RRH5 827 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 C19orf67A6NJJ6 358 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 OR6C75A6NL08 312 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 PSMA7O14818 248 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 ZMYND10O75800 440 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 POU2F2P09086 479 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 SPATA31D3P0C874 917 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 ATF2P15336 505 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 HOXA9P31269 272 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 DLG4P78352 724 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 FKBP3Q00688 224 aaKnown RBP18.63■□□□□ 0.57
USB1-209ENST00000564387 CBX2Q14781 532 aaPredicted RBP18.63■□□□□ 0.57
USB1-209ENST00000564387 CAMK4Q16566 473 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 CEP135Q66GS9 1140 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 ISM2Q6H9L7 571 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 OVOS1Q6IE37 1185 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 CES5AQ6NT32 575 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 SPATA31D4Q6ZUB0 917 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 DPH6Q7L8W6 267 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 FEZF2Q8TBJ5 459 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 ZNF707Q96C28 371 aaPredicted RBP18.63■□□□□ 0.57
USB1-209ENST00000564387 NECTIN4Q96NY8 510 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 RTP3Q9BQQ7 232 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 COL25A1Q9BXS0 654 aaPredicted RBP18.63■□□□□ 0.57
USB1-209ENST00000564387 VRTNQ9H8Y1 702 aa18.63■□□□□ 0.57
USB1-209ENST00000564387 CETN3O15182 167 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 HNRNPA1P09651 372 aaKnown RBP eCLIP18.62■□□□□ 0.57
USB1-209ENST00000564387 MTHFRP42898 656 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 VAMP7P51809 220 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 ZP2Q05996 745 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 MYO1EQ12965 1108 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 STIM1Q13586 685 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 ZACNQ401N2 412 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 RARS2Q5T160 578 aaKnown RBP18.62■□□□□ 0.57
USB1-209ENST00000564387 WSCD1Q658N2 575 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 TTI2Q6NXR4 508 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 USP37Q86T82 979 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 ADHFE1Q8IWW8 467 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 FAM186BQ8IYM0 893 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 TCEAL8Q8IYN2 117 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 TOP6BLQ8N6T0 577 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 HPDLQ96IR7 371 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 XYLT2Q9H1B5 865 aa18.62■□□□□ 0.57
USB1-209ENST00000564387 BDP1A6H8Y1 2624 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 CCDC195A0A1B0GUA6 201 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 BIN1O00499 593 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 GABRDO14764 452 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 RFPL2O75678 378 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 KRT19P08727 400 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 FAM163BP0C2L3 166 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 ATICP31939 592 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 BFSP1Q12934 665 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 GPR17Q13304 367 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 SOWAHAQ2M3V2 549 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 TDRD10Q5VZ19 366 aaKnown RBP18.61■□□□□ 0.57
USB1-209ENST00000564387 TMC5Q6UXY8 1006 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 TMEM86AQ8N2M4 240 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 PDCL2Q8N4E4 241 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 GPT2Q8TD30 523 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 RIPOR3Q96MK2 946 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 TSG101Q99816 390 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
USB1-209ENST00000564387 APOL5Q9BWW9 433 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 PHF7Q9BWX1 381 aaPredicted RBP18.61■□□□□ 0.57
USB1-209ENST00000564387 PRKD2Q9BZL6 878 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 AFF4Q9UHB7 1163 aaKnown RBP18.61■□□□□ 0.57
USB1-209ENST00000564387 L1RE1Q9UN81 338 aa18.61■□□□□ 0.57
USB1-209ENST00000564387 NCOR1O75376 2440 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 TRIM49BA6NDI0 452 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 SLC16A3O15427 465 aaKnown RBP18.6■□□□□ 0.57
USB1-209ENST00000564387 VNN1O95497 513 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 VNN2O95498 520 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 ATAT1Q5SQI0 421 aa18.6■□□□□ 0.57
USB1-209ENST00000564387 SV2AQ7L0J3 742 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms