RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 ERVK-5Q9HDB9 667 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 SAR1AQ9NR31 198 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 NKIRAS1Q9NYS0 192 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 IL1RAPL1Q9NZN1 696 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 VAV3Q9UKW4 847 aa11.73□□□□□ -0.53
TCF4-222ENST00000564228 PCNTO95613 3336 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ATP9AO75110 1047 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 PSMD10O75832 226 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 UCHL3P15374 230 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ADORA2AP29274 412 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 JAM2P57087 298 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ENOX2Q16206 610 aaKnown RBP11.72□□□□□ -0.53
TCF4-222ENST00000564228 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 TMEM119Q4V9L6 283 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ARMC3Q5W041 872 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 EEPD1Q7L9B9 569 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 GPR142Q7Z601 462 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 PHC3Q8NDX5 983 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ERP27Q96DN0 273 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 CAPNS2Q96L46 248 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ZFYVE28Q9HCC9 887 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 PCDHGA4Q9Y5G9 962 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 COMMD3-BMI1R4GMX3 469 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ADGRA2Q96PE1 1338 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 MIF4GDA9UHW6 222 aaKnown RBP11.72□□□□□ -0.53
TCF4-222ENST00000564228 EML1O00423 815 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 RGS20O76081 388 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 MYBL1P10243 752 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 BRAFP15056 766 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 TM4SF4P48230 202 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 SERPINB4P48594 390 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 HADHBP55084 474 aaKnown RBP11.72□□□□□ -0.53
TCF4-222ENST00000564228 IL9RQ01113 521 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 COASYQ13057 564 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 NOGQ13253 232 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 CRHR2Q13324 411 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 MTA1Q13330 715 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 CCDC6Q16204 474 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 CYP1B1Q16678 543 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 FAM26FQ5R3K3 315 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 C4orf50Q6ZRC1 276 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ANKRD42Q8N9B4 389 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 TTC8Q8TAM2 541 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 GPRASP2Q96D09 838 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 PITPNM3Q9BZ71 974 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 KCNK9Q9NPC2 374 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 DNAAF2Q9NVR5 837 aaKnown RBP11.72□□□□□ -0.53
TCF4-222ENST00000564228 DDX43Q9NXZ2 648 aaKnown RBP11.72□□□□□ -0.53
TCF4-222ENST00000564228 CIDEBQ9UHD4 219 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 HAO1Q9UJM8 370 aa11.72□□□□□ -0.53
TCF4-222ENST00000564228 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 POTEB3A0JP26 581 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 SMAPO00193 183 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 DDX3XO00571 662 aaKnown RBP eCLIP11.71□□□□□ -0.53
TCF4-222ENST00000564228 SORBS3O60504 671 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 STAM2O75886 525 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 T-ENOLP0DO92 83 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 KRT13P13646 458 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 TARSP26639 723 aaKnown RBP11.71□□□□□ -0.53
TCF4-222ENST00000564228 EPHB2P29323 1055 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 MAPK4P31152 587 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 GALCP54803 685 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 CYP4A11Q02928 519 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 AP1B1Q10567 949 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 PPP2R5CQ13362 524 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 GIT2Q14161 759 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 ECM1Q16610 540 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 PTPROQ16827 1216 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 SNX30Q5VWJ9 437 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 SEPT14Q6ZU15 432 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 DYMQ7RTS9 669 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 FRMD5Q7Z6J6 570 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 PPFIBP2Q8ND30 876 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
TCF4-222ENST00000564228 DDX12PQ92771 950 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.53
TCF4-222ENST00000564228 RIT2Q99578 217 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 MIS12Q9H081 205 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 ZNF212Q9UDV6 495 aa11.71□□□□□ -0.53
TCF4-222ENST00000564228 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
TCF4-222ENST00000564228 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.54
TCF4-222ENST00000564228 KDM3AQ9Y4C1 1321 aa11.71□□□□□ -0.54
TCF4-222ENST00000564228 STRNO43815 780 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 MED24O75448 989 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SLC18A1P54219 525 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 HTRA3P83110 453 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 SLC34A1Q06495 639 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 LSAMPQ13449 338 aa11.7□□□□□ -0.54
TCF4-222ENST00000564228 PRPF4BQ13523 1007 aaKnown RBP11.7□□□□□ -0.54
TCF4-222ENST00000564228 LRRC41Q15345 812 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms