RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MAMDC2Q7Z304 686 aaPredicted RBP11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 LRRC71Q8N4P6 559 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 TRIML1Q8N9V2 468 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 SLC25A18Q9H1K4 315 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 ASAH2Q9NR71 780 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 CDY1Q9Y6F8 540 aa11.97□□□□□ -0.49
HDGFL3-204ENST00000563790 NFASCO94856 1347 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 PRRG1O14668 218 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 HLA-BQ31612 363 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 FAM160B1Q5W0V3 765 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 CCDC60Q8IWA6 550 aaPredicted RBP11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 TCEAL8Q8IYN2 117 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 ELMOD1Q8N336 334 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 ZNF461Q8TAF7 563 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 EXTL1Q92935 676 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 ZFP42Q96MM3 310 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 GKN1Q9NS71 199 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 THG1LQ9NWX6 298 aaKnown RBP11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 BCCIPQ9P287 314 aaKnown RBP eCLIP11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 FTSJ1Q9UET6 329 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 ANAPC4Q9UJX5 808 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 INSL5Q9Y5Q6 135 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 UBIAD1Q9Y5Z9 338 aa11.96□□□□□ -0.49
HDGFL3-204ENST00000563790 NSD1Q96L73 2696 aaPredicted RBP11.96□□□□□ -0.5
HDGFL3-204ENST00000563790 A0A1B0GTW7 788 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 M0R2C6 588 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 BACH1O14867 736 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 RFPL3O75679 317 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 IFIT2P09913 472 aaKnown RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 ELF1P32519 619 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 MLH1P40692 756 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 TRAF1Q13077 416 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 HSP90AA2PQ14568 343 aaPredicted RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 RGL4Q8IZJ4 473 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 ZNF419Q96HQ0 510 aaPredicted RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 POLR3CQ9BUI4 534 aaPredicted RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 EBF3Q9H4W6 596 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 AGPAT5Q9NUQ2 364 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 CEP72Q9P209 647 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 CEP131Q9UPN4 1083 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 MYH10P35580 1976 aa11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 DIDO1Q9BTC0 2240 aaKnown RBP11.95□□□□□ -0.5
HDGFL3-204ENST00000563790 ABLIM3O94929 683 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 WEE1P30291 646 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 CD97P48960 835 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 BNC1Q01954 994 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 STXBP5Q5T5C0 1151 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 LSMEM2Q8N112 164 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 SLC7A3Q8WY07 619 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 CD101Q93033 1021 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 INO80BQ9C086 356 aaPredicted RBP11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 PLAAQ9Y263 795 aa11.94□□□□□ -0.5
HDGFL3-204ENST00000563790 A0A1W2PRU2 124 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 PRAMEF12O95522 483 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 RNF224P0DH78 156 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 ITGA4P13612 1032 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 ATF2P15336 505 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 GLDCP23378 1020 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 GJA4P35212 333 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 CDC42EP1Q00587 391 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 ELAVL2Q12926 359 aaKnown RBP11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 SYCP2LQ5T4T6 812 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 CATSPER4Q7RTX7 472 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 CCDC33Q8N5R6 958 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 DCBLD1Q8N8Z6 715 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 SMG8Q8ND04 991 aaKnown RBP11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 CNNM3Q8NE01 707 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 SMARCC2Q8TAQ2 1214 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 HASPINQ8TF76 798 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 HMGB4Q8WW32 186 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 LY9Q9HBG7 655 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 ZNF302Q9NR11 478 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 BACE2Q9Y5Z0 518 aa11.93□□□□□ -0.5
HDGFL3-204ENST00000563790 ZNF469Q96JG9 3925 aaPredicted RBP11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 USP11P51784 963 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 ROR1Q01973 937 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 TRIM68Q6AZZ1 485 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 GSTCDQ8NEC7 633 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 MIB2Q96AX9 1013 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 TOMM22Q9NS69 142 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 CACNG4Q9UBN1 327 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
HDGFL3-204ENST00000563790 NUMA1Q14980 2115 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms