RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 M0QZQ0 153 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 CPLX1O14810 134 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 PPEF2O14830 753 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 NEMFO60524 1076 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 SOAT2O75908 522 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ZIC2O95409 532 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ATP2B1P20020 1258 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 CTXN3Q4LDR2 81 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 DGKKQ5KSL6 1271 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 CEP68Q76N32 757 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 RALGPS2Q86X27 583 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ZC3H10Q96K80 434 aaKnown RBP11.36□□□□□ -0.59
SF3B3-204ENST00000563739 TBC1D32Q96NH3 1257 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ADPGKQ9BRR6 497 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 TM6SF1Q9BZW5 370 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 TUFT1Q9NNX1 390 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ARHGAP28Q9P2N2 729 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 ZNF638Q14966 1978 aaKnown RBP11.36□□□□□ -0.59
SF3B3-204ENST00000563739 THADAQ6YHU6 1953 aa11.36□□□□□ -0.59
SF3B3-204ENST00000563739 CCDC163A0A0D9SF12 145 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 MTMR11A4FU01 709 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 SRRM3A6NNA2 597 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 BTBD18B2RXH4 712 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 DCLK1O15075 740 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 FOXD2O60548 495 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PFKFB2O60825 505 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 RPP40O75818 363 aaKnown RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 CHRM1P11229 460 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PSMA5P28066 241 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 ELF1P32519 619 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 OSTNP61366 133 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 CYP4F8P98187 520 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 SLC10A6Q3KNW5 377 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 TMEM196Q5HYL7 178 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 CYP4A22Q5TCH4 519 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 TMEM150AQ86TG1 271 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 LEMD2Q8NC56 503 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 DEPTORQ8TB45 409 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 ZBTB45Q96K62 511 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PGLYRP2Q96PD5 576 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PCDH15Q96QU1 1955 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 PHLPP2Q6ZVD8 1323 aa11.35□□□□□ -0.59
SF3B3-204ENST00000563739 LNP1A1A4G5 178 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CYSRT1A8MQ03 144 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 H7C4K7 107 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 OAZ2O95190 189 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CAPNS1P04632 268 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 ATF6P18850 670 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 KRT2P35908 639 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 GUCY2FP51841 1108 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 KPNA1P52294 538 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-204ENST00000563739 ZNF252P-AS1Q0IIN9 211 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 ZNF568Q3ZCX4 644 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CENPPQ6IPU0 288 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CACNA2D4Q7Z3S7 1137 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CSGALNACT1Q8TDX6 532 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 ZNF512Q96ME7 567 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-204ENST00000563739 FAM83CQ9BQN1 747 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 EDEM2Q9BV94 578 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 OBP2AQ9NY56 170 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 CCL26Q9Y258 94 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 PCDHGA5Q9Y5G8 931 aa11.34□□□□□ -0.59
SF3B3-204ENST00000563739 PCNX2A6NKB5 2137 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 ADAMTS20P59510 1910 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 ADAMTS9Q9P2N4 1935 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 CDX4O14627 284 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-204ENST00000563739 FAM189A1O60320 539 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 MARCH6O60337 910 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 AKAP3O75969 853 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 EGFP01133 1207 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 CPB1P15086 417 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 RPA1P27694 616 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 WEE1P30291 646 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 LRPAP1P30533 357 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 NPTX2P47972 431 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 NOVA1P51513 510 aaKnown RBP11.33□□□□□ -0.6
SF3B3-204ENST00000563739 DUSP4Q13115 394 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 ARHGAP29Q52LW3 1261 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 IQCEQ6IPM2 695 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
SF3B3-204ENST00000563739 SYNPOQ8N3V7 929 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-204ENST00000563739 ATAD1Q8NBU5 361 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 OR10T2Q8NGX3 314 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 PSMG2Q969U7 264 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
SF3B3-204ENST00000563739 HHIPQ96QV1 700 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 NACC1Q96RE7 527 aa11.33□□□□□ -0.6
SF3B3-204ENST00000563739 LPIN3Q9BQK8 851 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms