RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 C8orf33Q9H7E9 229 aaPredicted RBP11.18□□□□□ -0.62
BBS4-205ENST00000562219 PLEKHA5Q9HAU0 1116 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 PCDHB6Q9Y5E3 794 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 CHD8Q9HCK8 2581 aa11.18□□□□□ -0.62
BBS4-205ENST00000562219 HELZP42694 1942 aaKnown RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 TTC26A0AVF1 554 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 SPECC1L-ADORA2AF8WAN1 911 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 SLC30A4O14863 429 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 CLTAP09496 248 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 OR4Q2P0C623 313 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 CYP3A5P20815 502 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 CDC25AP30304 524 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 CTHP32929 405 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 CNR2P34972 360 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
BBS4-205ENST00000562219 ALDH1A3P47895 512 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 SOX9P48436 509 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 KPNA1P52294 538 aaPredicted RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 SPAG1Q07617 926 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 RAD51AP2Q09MP3 1159 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 DUSP4Q13115 394 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 GPR17Q13304 367 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 IL17AQ16552 155 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 STXBP5Q5T5C0 1151 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 DTHD1Q6ZMT9 781 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 RALGPS2Q86X27 583 aaPredicted RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 KIF12Q96FN5 646 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 MMTAG2Q9BU76 263 aaKnown RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 SEMA4GQ9NTN9 838 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
BBS4-205ENST00000562219 UBQLN1Q9UMX0 589 aaKnown RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 TIMM13Q9Y5L4 95 aaPredicted RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.17□□□□□ -0.62
BBS4-205ENST00000562219 CNOT1A5YKK6 2376 aaKnown RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 MYBPHLA2RUH7 354 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 CHURC1-FNTBB4DL54 471 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 H0YCG3 227 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 K7ESF4 209 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 XPOTO43592 962 aaKnown RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 HRO43593 1189 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 FOXD2O60548 495 aaPredicted RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 FGF19O95750 216 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ADRB1P08588 477 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 TYMPP19971 482 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 FNTBP49356 437 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 DMWDQ09019 674 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ZRSR1Q15695 479 aaKnown RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 ZBTB6Q15916 424 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 CSRP2Q16527 193 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 KYAT1Q16773 422 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 DGKKQ5KSL6 1271 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 HYIQ5T013 277 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 OVOS1Q6IE37 1185 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 CENPPQ6IPU0 288 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 TXNDC11Q6PKC3 985 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 PRR23CQ6ZRP0 262 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 Q6ZS52 159 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 GAREM2Q75VX8 874 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 LONP2Q86WA8 852 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ARID3BQ8IVW6 561 aaPredicted RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 TMEM130Q8N3G9 435 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 KCTD17Q8N5Z5 321 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 FAM200AQ8TCP9 573 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 PSMG2Q969U7 264 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 BICD1Q96G01 975 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 MKNK1Q9BUB5 465 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 HAPLN2Q9GZV7 340 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 SH2B1Q9NRF2 756 aaPredicted RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
BBS4-205ENST00000562219 OBP2AQ9NY56 170 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ASB3Q9Y575 518 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 NUP205Q92621 2012 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 SDK1Q7Z5N4 2213 aa11.16□□□□□ -0.62
BBS4-205ENST00000562219 ANAPC1Q9H1A4 1944 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 MTMR11A4FU01 709 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 DPYSL4O14531 572 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 HNRNPDLO14979 420 aaKnown RBP11.15□□□□□ -0.62
BBS4-205ENST00000562219 FAM189A1O60320 539 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 KRT37O76014 449 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 ODC1P11926 461 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 HOXA6P31267 233 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 TNFSF9P41273 254 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 SRSF5Q13243 272 aaKnown RBP11.15□□□□□ -0.62
BBS4-205ENST00000562219 CCINQ13939 588 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 PPM1JQ5JR12 505 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 HEATR6Q6AI08 1181 aaKnown RBP11.15□□□□□ -0.62
BBS4-205ENST00000562219 DSTYKQ6XUX3 929 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 HAUS6Q7Z4H7 955 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 DNAJB7Q7Z6W7 309 aaPredicted RBP11.15□□□□□ -0.62
BBS4-205ENST00000562219 ITIH5Q86UX2 942 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 TTC9BQ8N6N2 239 aa11.15□□□□□ -0.62
BBS4-205ENST00000562219 SYT2Q8N9I0 419 aaPredicted RBP11.15□□□□□ -0.62
BBS4-205ENST00000562219 ATAD1Q8NBU5 361 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms