RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 LINC00271P0C7V0 271 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 LAG3P18627 525 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 BMP8BP34820 402 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 ARID5BQ14865 1188 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 DRAP1Q14919 205 aaPredicted RBP13.56□□□□□ -0.24
CMTM4-203ENST00000561680 ARHGAP44Q17R89 818 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 PDXDC1Q6P996 788 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 CNGA4Q8IV77 575 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 FIBCD1Q8N539 461 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 TOP6BLQ8N6T0 577 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 COLGALT1Q8NBJ5 622 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 HASPINQ8TF76 798 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 CPLX3Q8WVH0 158 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
CMTM4-203ENST00000561680 SUSD3Q96L08 255 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 SPAG5Q96R06 1193 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 PPP1R9BQ96SB3 815 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 COLEC11Q9BWP8 271 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 SDCBP2Q9H190 292 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 ADAM28Q9UKQ2 775 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 FAN1Q9Y2M0 1017 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 MYO16Q9Y6X6 1858 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 LRRC53A6NM62 1247 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 AKR1B15C9JRZ8 316 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 ODC1P11926 461 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 ACO1P21399 889 aaKnown RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 KRT9P35527 623 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 PBX3P40426 434 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 BRCC3P46736 316 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 ALDH7A1P49419 539 aaKnown RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 SOWAHAQ2M3V2 549 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 TIGD5Q53EQ6 642 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 FAM109BQ6ICB4 259 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 KCNT2Q6UVM3 1135 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 DPH6Q7L8W6 267 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 TMEM173Q86WV6 379 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 APPL2Q8NEU8 664 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 ZNF397Q8NF99 534 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 ZNF558Q96NG5 402 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 MMS19Q96T76 1030 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 DNAJC7Q99615 494 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 NUCKS1Q9H1E3 243 aaKnown RBP13.55□□□□□ -0.24
CMTM4-203ENST00000561680 CISHQ9NSE2 258 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 L1RE1Q9UN81 338 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
CMTM4-203ENST00000561680 MYO7AQ13402 2215 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 LCHNA4D1U4 455 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 CYB561D2O14569 222 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 HUS1O60921 280 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 TACC1O75410 805 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 CAPN15O75808 1086 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 EFEMP2O95967 443 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 CYP11A1P05108 521 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 FAM163BP0C2L3 166 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 PNMA6AP0CW24 399 aaPredicted RBP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SOX5P35711 763 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 STAT1P42224 750 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 RABGGTBP53611 331 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 CDH8P55286 799 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 GSDMDP57764 484 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SPOUT1Q5T280 376 aaKnown RBP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 E4F1Q66K89 784 aaPredicted RBP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 DSTYKQ6XUX3 929 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 FAM71AQ8IYT1 594 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 ADGRF2Q8IZF7 708 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SLC39A11Q8N1S5 342 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 TMEM86AQ8N2M4 240 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 PDCL2Q8N4E4 241 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 TTC39CQ8N584 583 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 KBTBD7Q8WVZ9 684 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SYN2Q92777 582 aaPredicted RBP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 PCDHB8Q9UN66 801 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
CMTM4-203ENST00000561680 SF3B1O75533 1304 aaKnown RBP eCLIP13.54□□□□□ -0.24
CMTM4-203ENST00000561680 LINC01553A4QN01 128 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 GRXCR1A8MXD5 290 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 NT5C1B-RDH14C9J2C7 533 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 I3L4J1 428 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 FOXN3O00409 490 aaPredicted RBP13.53□□□□□ -0.24
CMTM4-203ENST00000561680 TRAPPC3O43617 180 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 CILPO75339 1184 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 TADA2AO75478 443 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 CD58P19256 250 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 TYMPP19971 482 aa13.53□□□□□ -0.24
CMTM4-203ENST00000561680 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms