RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SCUBE1Q8IWY4 988 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 GRAPLQ8TC17 118 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 ELMO2Q96JJ3 720 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 ERGIC2Q96RQ1 377 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SIKE1Q9BRV8 207 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SIK2Q9H0K1 926 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 NBPF26B4DH59 902 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 WBP4O75554 376 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 DLGAP3O95886 979 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 MOCS2O96007 188 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 TAP1Q03518 808 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 USP10Q14694 798 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 IYDQ6PHW0 289 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 RIBC1Q8N443 379 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 HDAC7Q8WUI4 952 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 CNDP1Q96KN2 507 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 NR1H4Q96RI1 486 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SAMD9LQ8IVG5 1584 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 GJC2Q5T442 439 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 RBM43Q6ZSC3 357 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 METTL5Q9NRN9 209 aaKnown RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 TBC1D22BQ9NU19 505 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 TRIM49D1C9J1S8 452 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 C6orf10Q5SRN2 563 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 TRIM65Q6PJ69 517 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 MTHFD1LQ6UB35 978 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 CATSPER4Q7RTX7 472 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 GPR141Q7Z602 305 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 PLA2R1Q13018 1463 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SERPINB5P36952 375 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 ACOT2P49753 483 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SLC25A41Q8N5S1 370 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM71DQ8N9W8 422 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 B4GALNT2Q8NHY0 566 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 OTULINQ96BN8 352 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SMNDC1O75940 238 aaKnown RBP eCLIP10.68□□□□□ -0.71e-7■■■□□ 18.1
GTF3C1-202ENST00000561623 FAM153BP0C7A2 387 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 RGS7P49802 495 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM153CQ494X1 144 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 SLC13A5Q86YT5 568 aaPredicted RBP10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 TMEM237Q96Q45 408 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM153AQ9UHL3 310 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
GTF3C1-202ENST00000561623 CYP27B1O15528 508 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 BBOX1O75936 387 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PPARGP37231 505 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 NLRP11P59045 1033 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 DEPDC1Q5TB30 811 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 LRRC8BQ6P9F7 803 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 NUDT18Q6ZVK8 323 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 CCDC103Q8IW40 242 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 USP33Q8TEY7 942 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 DCLRE1BQ9H816 532 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ZNF302Q9NR11 478 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PLEKHG2Q9H7P9 1386 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 GRAP2O75791 330 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SERPINI2O75830 405 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SERPINB9P50453 376 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PTPAQ15257 358 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 HEATR4Q86WZ0 1026 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 FOXP4Q8IVH2 680 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 APLFQ8IW19 511 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ZNF280CQ8ND82 737 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PRCCQ92733 491 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 MAGEB5Q9BZ81 275 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 AIPL1Q9NZN9 384 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 REREQ9P2R6 1566 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PNPLA7Q6ZV29 1317 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 NFIBO00712 420 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 OASLQ15646 514 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 TAS2R42Q7RTR8 314 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 MPP4Q96JB8 637 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SH3GL2Q99962 352 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 KLHL25Q9H0H3 589 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 HSPA1AP0DMV8 641 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 HSPA1BP0DMV9 641 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 MAP3K14Q99558 947 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ARHGEF40Q8TER5 1519 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 YWHABP31946 246 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 CLK1P49759 484 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 BLVRAP53004 296 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PSMC5P62195 406 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SUGP1Q8IWZ8 645 aaKnown RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 SPATA18Q8TC71 538 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 CAVIN3Q969G5 261 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ZKSCAN4Q969J2 545 aaPredicted RBP10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PI4K2AQ9BTU6 479 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 TMEM120AQ9BXJ8 343 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 STAP1Q9ULZ2 295 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 C15orf41Q9Y2V0 281 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 ANKARQ7Z5J8 1434 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms