RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 FAM47CQ5HY64 1035 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 SMYD5Q6GMV2 418 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 TAF2Q6P1X5 1199 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 SYT10Q6XYQ8 523 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 EP400NLQ6ZTU2 488 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 ENOSF1Q7L5Y1 443 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 ERMP1Q7Z2K6 904 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 KIAA1328Q86T90 577 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 CDR2LQ86X02 465 aaPredicted RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 SUGP1Q8IWZ8 645 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 TMEM192Q8IY95 271 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 THNSL1Q8IYQ7 743 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 ZNF710Q8N1W2 664 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 TXLNBQ8N3L3 684 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 NME8Q8N427 588 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 CEP120Q8N960 986 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 OR5B17Q8NGF7 314 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 KIF18AQ8NI77 898 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 OLIG1Q8TAK6 271 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 HELQQ8TDG4 1101 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 SHC3Q92529 594 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 ZNF592Q92610 1267 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 KAT5Q92993 513 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 JAKMIP2Q96AA8 810 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 PABPC5Q96DU9 382 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 MRPL38Q96DV4 380 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 FAM81BQ96LP2 452 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 KREMEN1Q96MU8 473 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 NT5C1BQ96P26 610 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 OSMRQ99650 979 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 IFIH1Q9BYX4 1025 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 TSGA10Q9BZW7 698 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 LACRTQ9GZZ8 138 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 RPF1Q9H9Y2 349 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 CDHR5Q9HBB8 845 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.08□□□□□ -1.12
TPM1-231ENST00000561395 GTF2IRD1Q9UHL9 959 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 NENFQ9UMX5 172 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 PAXBP1Q9Y5B6 917 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 PCDHA13Q9Y5I0 950 aa8.08□□□□□ -1.12
TPM1-231ENST00000561395 KMT2BQ9UMN6 2715 aaPredicted RBP8.08□□□□□ -1.12
TPM1-231ENST00000561395 ATP8B3O60423 1300 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 A0A087X0T9 212 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 A0A1B0GUA9 196 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 TMEM221A6NGB7 291 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 M0R296 226 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 FOXN3O00409 490 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 FANCGO15287 622 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 MEFVO15553 781 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 PJA2O43164 708 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 KRT86O43790 486 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 PARNO95453 639 aaKnown RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 ABL1P00519 1130 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 FAM228BP0C875 321 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 STAG3L1P0CL83 205 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 CXCL8P10145 99 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 FGFR4P22455 802 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 AXLP30530 894 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 HOXA11P31270 313 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 MAGEA1P43355 309 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 CRYBB1P53674 252 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 GNG11P61952 73 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 GCNT1Q02742 428 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 GFPT1Q06210 699 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 BFSP2Q13515 415 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 NCOA4Q13772 614 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 BMS1Q14692 1282 aaKnown RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 DUOXA2Q1HG44 320 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 CCDC122Q5T0U0 273 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 C10orf76Q5T2E6 689 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 GDF6Q6KF10 455 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 NOTUMQ6P988 496 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 CATSPER4Q7RTX7 472 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 TRAPPC11Q7Z392 1133 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 APBB1IPQ7Z5R6 666 aaPredicted RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 VPS36Q86VN1 386 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 SESTD1Q86VW0 696 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 RNF135Q8IUD6 432 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 EFCAB13Q8IY85 973 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 FAM71AQ8IYT1 594 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 PPM1KQ8N3J5 372 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 EDAQ92838 391 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 PBXIP1Q96AQ6 731 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 ANKRD36BP1Q96IX9 119 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 WDR24Q96S15 920 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 RAD9AQ99638 391 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 ADPGKQ9BRR6 497 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 C17orf80Q9BSJ5 609 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 SYT11Q9BT88 431 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 PI4K2AQ9BTU6 479 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.07□□□□□ -1.12
TPM1-231ENST00000561395 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 LUC7LQ9NQ29 371 aaKnown RBP8.07□□□□□ -1.12
TPM1-231ENST00000561395 C1orf112Q9NSG2 853 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 MYO1AQ9UBC5 1043 aa8.07□□□□□ -1.12
TPM1-231ENST00000561395 TRIM10Q9UDY6 481 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms