RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TEX15Q9BXT5 2789 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 ZMYM6O95789 1325 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 NOTCH2Q04721 2471 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CCDC163A0A0D9SF12 145 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 SLC38A8A6NNN8 435 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 PATE3B3GLJ2 98 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 DCLK1O15075 740 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 RHOP08100 348 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 GBP1P32455 592 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 MAPK8P45983 427 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 SOX9P48436 509 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 NT5C2P49902 561 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 IRX4P78413 519 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 GRM4Q14833 912 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 UBE2SQ16763 222 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 ZNF423Q2M1K9 1284 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 SLC5A9Q2M3M2 681 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 FAM78AQ5JUQ0 283 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 AXDND1Q5T1B0 1012 aaPredicted RBP5.95□□□□□ -1.46
HERC1-213ENST00000561359 TMEM164Q5U3C3 297 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 FUT10Q6P4F1 479 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 C1orf228Q6PIY5 440 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 GPR65Q8IYL9 337 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 ZNF843Q8N446 348 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 MSANTD3Q96H12 275 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 FAM227BQ96M60 508 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 MDFIQ99750 246 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 DUSP15Q9H1R2 295 aaPredicted RBP5.95□□□□□ -1.46
HERC1-213ENST00000561359 AGO4Q9HCK5 861 aaKnown RBP5.95□□□□□ -1.46
HERC1-213ENST00000561359 ZBTB40Q9NUA8 1239 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 DNAJB12Q9NXW2 375 aaKnown RBP5.95□□□□□ -1.46
HERC1-213ENST00000561359 SEC63Q9UGP8 760 aaKnown RBP5.95□□□□□ -1.46
HERC1-213ENST00000561359 TCEAL9Q9UHQ7 104 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 SLC6A14Q9UN76 642 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 MYO9AB2RTY4 2548 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 TICRRQ7Z2Z1 1910 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 TTC41PQ6P2S7 1318 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 CNTNAP2Q9UHC6 1331 aa5.95□□□□□ -1.46
HERC1-213ENST00000561359 A0A087WZ62 844 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 A0A0D9SFI3 127 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 TADA2AO75478 443 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 EFEMP2O95967 443 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 ITGB2P05107 769 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 POU2F2P09086 479 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 SPATA31C1P0DKV0 1188 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 FCARP24071 287 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 CDC42EP1Q00587 391 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 PON2Q15165 354 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 PSMD5Q16401 504 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 UVSSAQ2YD98 709 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 CEP55Q53EZ4 464 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 COX20Q5RI15 118 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 TXNDC11Q6PKC3 985 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 VITQ6UXI7 678 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 C8orf86Q6ZUL3 223 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 ZNF589Q86UQ0 364 aaPredicted RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 CEP57Q86XR8 500 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 TREML1Q86YW5 311 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 RGL4Q8IZJ4 473 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 CMTR1Q8N1G2 835 aaKnown RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 SYNPOQ8N3V7 929 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 LINC01465Q8N7H1 131 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 PI4K2BQ8TCG2 481 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 DEPDC1BQ8WUY9 529 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 NUDT8Q8WV74 236 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 RRP36Q96EU6 259 aaKnown RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 FAM167AQ96KS9 214 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 ASB16Q96NS5 453 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 CLSTN3Q9BQT9 956 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 FDXACB1Q9BRP7 624 aaPredicted RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 KRT23Q9C075 422 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 INO80BQ9C086 356 aaPredicted RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 C8orf33Q9H7E9 229 aaPredicted RBP5.94□□□□□ -1.46
HERC1-213ENST00000561359 LY9Q9HBG7 655 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 ADAM28Q9UKQ2 775 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 PCDHA6Q9UN73 950 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 STARD13Q9Y3M8 1113 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 PCDHA8Q9Y5H6 950 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 GON4LQ3T8J9 2241 aa5.94□□□□□ -1.46
HERC1-213ENST00000561359 CCDC194A0A1B0GVG4 234 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ARL5CA6NH57 179 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 SPECC1L-ADORA2AF8WAN1 911 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 CAPN9O14815 690 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
HERC1-213ENST00000561359 ADAM12O43184 909 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ZNF862O60290 1169 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ATG13O75143 517 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 SASH3O75995 380 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 RARAP10276 462 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ITGA4P13612 1032 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 PTPN2P17706 415 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ZNF76P36508 570 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 VIPR2P41587 438 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 ABCG1P45844 678 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 DNM2P50570 870 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 SCNN1GP51170 649 aa5.93□□□□□ -1.46
HERC1-213ENST00000561359 MLLT6P55198 1093 aaPredicted RBP5.93□□□□□ -1.46
HERC1-213ENST00000561359 FAM193AP78312 1265 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms