RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 LCHNA4D1U4 455 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 EPB41L2O43491 1005 aaKnown RBP6.98□□□□□ -1.29
LRRC28-220ENST00000561253 FBXO21O94952 628 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 APOL3O95236 402 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 PRLP01236 227 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 S100BP04271 92 aaPredicted RBP6.98□□□□□ -1.29
LRRC28-220ENST00000561253 GLDCP23378 1020 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 GLRBP48167 497 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 TDO2P48775 406 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ALDH6A1Q02252 535 aaKnown RBP6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ROM1Q03395 351 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 PRAMEF9Q5VWM5 478 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 SLFN12LQ6IEE8 588 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ESPNLQ6ZVH7 1005 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ERO1BQ86YB8 467 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 KYQ8NBH2 561 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ZBTB8AQ96BR9 441 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 MAML3Q96JK9 1138 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 NOX5Q96PH1 765 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 PPP1R16BQ96T49 567 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 SLC38A3Q99624 504 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ASPSCR1Q9BZE9 553 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 NACAP1Q9BZK3 213 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 IRF2BPLQ9H1B7 796 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 POFUT1Q9H488 388 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 SWAP70Q9UH65 585 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 ZBTB21Q9ULJ3 1066 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 AFG3L2Q9Y4W6 797 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 RNF114Q9Y508 228 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 RBM8AQ9Y5S9 174 aaKnown RBP6.98□□□□□ -1.29
LRRC28-220ENST00000561253 PMF1-BGLAPU3KQ54 211 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 NEDD4P46934 1319 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 BRCA2P51587 3418 aa6.98□□□□□ -1.29
LRRC28-220ENST00000561253 LAMB1P07942 1786 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 LAMA4Q16363 1823 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PHIPQ8WWQ0 1821 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 A0A1W2PRG0 241 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 TCAF2A6NFQ2 919 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 GOLGA8AA7E2F4 631 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 GOLGA8BA8MQT2 603 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 K7ESF4 209 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 NFIBO00712 420 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PRDM1O75626 825 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 MPIG6BO95866 241 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 GH2P01242 217 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 ECE1P42892 770 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 SCAND1P57086 179 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 HAND2P61296 217 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PPATQ06203 517 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PPIL2Q13356 520 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 ADAM9Q13443 819 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 SMAD4Q13485 552 aaKnown RBP6.97□□□□□ -1.29
LRRC28-220ENST00000561253 DEFB115Q30KQ5 88 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 CERKLQ49MI3 558 aaPredicted RBP6.97□□□□□ -1.29
LRRC28-220ENST00000561253 AKNAD1Q5T1N1 836 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PHF19Q5T6S3 580 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 FERMT2Q96AC1 680 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 CAPNS2Q96L46 248 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 CCDC17Q96LX7 622 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 PTPN18Q99952 460 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 MYL10Q9BUA6 226 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 AMNQ9BXJ7 453 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 METTL14Q9HCE5 456 aaKnown RBP6.97□□□□□ -1.29
LRRC28-220ENST00000561253 IL17RBQ9NRM6 502 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 ZFP69BQ9UJL9 534 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 CROTQ9UKG9 612 aa6.97□□□□□ -1.29
LRRC28-220ENST00000561253 ABT1Q9ULW3 272 aaKnown RBP6.97□□□□□ -1.29
LRRC28-220ENST00000561253 DOCK1Q14185 1865 aa6.96□□□□□ -1.29
LRRC28-220ENST00000561253 A0A0G2JLL6 359 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 PAX4O43316 350 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 CYP7B1O75881 506 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 PRPF6O94906 941 aaKnown RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ASNSP08243 561 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 PCP11498 1178 aaKnown RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 HSPA4P34932 840 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 THBS2P35442 1172 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ERVK-21P61565 698 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 NOGQ13253 232 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 SEPT2Q15019 361 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ABCB5Q2M3G0 1257 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 KIAA1755Q5JYT7 1200 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ODR4Q5SWX8 454 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 XP32Q5T750 250 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 LRSAM1Q6UWE0 723 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ATG14Q6ZNE5 492 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 TMEM179Q6ZVK1 233 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 PRRT2Q7Z6L0 340 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 CXorf67Q86X51 503 aaPredicted RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 TMEFF1Q8IYR6 380 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 LINC00482Q8N8I6 264 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 ACER1Q8TDN7 264 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 BRI3BPQ8WY22 251 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 OPTNQ96CV9 577 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 TACO1Q9BSH4 297 aaKnown RBP6.96□□□□□ -1.3
LRRC28-220ENST00000561253 BTBD2Q9BX70 525 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 OR10A5Q9H207 317 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 SEMA4AQ9H3S1 761 aa6.96□□□□□ -1.3
LRRC28-220ENST00000561253 TCP11L1Q9NUJ3 509 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms