RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 ADOQ96SZ5 270 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 GPHA2Q96T91 129 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 SOX7Q9BT81 388 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 ISCA1Q9BUE6 129 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 PITHD1Q9GZP4 211 aaPredicted RBP5.11□□□□□ -1.59
TMOD3-207ENST00000560549 CDH19Q9H159 772 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 ZIM2Q9NZV7 527 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 DNAI1Q9UI46 699 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 PCNTO95613 3336 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 TTC41PQ6P2S7 1318 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 COL15A1P39059 1388 aa5.11□□□□□ -1.59
TMOD3-207ENST00000560549 TOGARAM1Q9Y4F4 1720 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 SBF2Q86WG5 1849 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 SLC26A4O43511 780 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA12O60330 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PRPF6O94906 941 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 MT-CO1P00395 513 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 CYP19A1P11511 503 aaPredicted RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 C6P13671 934 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 HNRNPLP14866 589 aaKnown RBP eCLIP5.1□□□□□ -1.596e-11■■■■□ 19.5
TMOD3-207ENST00000560549 BDNFP23560 247 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 HSPA4P34932 840 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 GPR3P46089 330 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 ADCY7P51828 1080 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 ATP2C1P98194 919 aaPredicted RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 MAP3K12Q12852 859 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 TCIRG1Q13488 830 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 RIN1Q13671 783 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PKP1Q13835 747 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 HLFQ16534 295 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 LRRC24Q50LG9 513 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 NXNQ6DKJ4 435 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PPP4R4Q6NUP7 873 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 CWC27Q6UX04 472 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 TCEAL8Q8IYN2 117 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 HOOK2Q96ED9 719 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 FAM227BQ96M60 508 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PUS3Q9BZE2 481 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 BOLA2Q9H3K6 86 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PRDM12Q9H4Q4 367 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 CASS4Q9NQ75 786 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 CWC25Q9NXE8 425 aaPredicted RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 DBNLQ9UJU6 430 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 DENND2AQ9ULE3 1009 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA9Q9Y5G4 932 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA8Q9Y5G5 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA7Q9Y5G6 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA6Q9Y5G7 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA3Q9Y5H0 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PCDHGA2Q9Y5H1 932 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 SNX14Q9Y5W7 946 aa5.1□□□□□ -1.59
TMOD3-207ENST00000560549 GOLGB1Q14789 3259 aaKnown RBP5.1□□□□□ -1.59
TMOD3-207ENST00000560549 PAPPAQ13219 1627 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 TNS1Q9HBL0 1735 aaKnown RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 KDM1AO60341 852 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 CPA1P15085 419 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 ACO1P21399 889 aaKnown RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 LSP1P33241 339 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 MSX2P35548 267 aaPredicted RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 POU5F1BQ06416 359 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 PCBP2Q15366 365 aaKnown RBP eCLIP5.09□□□□□ -1.591e-13■■■■■ 32.3
TMOD3-207ENST00000560549 EZH2Q15910 746 aaKnown RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 DGKDQ16760 1214 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 KLHDC10Q6PID8 442 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 MAMDC4Q6UXC1 1216 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 ADGRE4PQ86SQ3 457 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 PHYKPLQ8IUZ5 450 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 CNTROBQ8N137 903 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 C7orf31Q8N865 590 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 SHCBP1Q8NEM2 672 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 C1orf162Q8NEQ5 155 aaPredicted RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 E2F7Q96AV8 911 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 TMEM176AQ96HP8 235 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 TMX3Q96JJ7 454 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 UPF3BQ9BZI7 483 aaKnown RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 MTG2Q9H4K7 406 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 POLR3BQ9NW08 1133 aaPredicted RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 PLA2G3Q9NZ20 509 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 KCMF1Q9P0J7 381 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 SAE1Q9UBE0 346 aaPredicted RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 VWA7Q9Y334 891 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 RBM8AQ9Y5S9 174 aaKnown RBP5.09□□□□□ -1.59
TMOD3-207ENST00000560549 FPGT-TNNI3KV9GXZ4 949 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 TUBGCP6Q96RT7 1819 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 CACNA1FO60840 1977 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 BCL9O00512 1426 aa5.09□□□□□ -1.59
TMOD3-207ENST00000560549 A0A0D9SFI3 127 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 E2F8A0AVK6 867 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 PMS2P1A4D2B8 440 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 OPHN1O60890 802 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 DTNBO60941 627 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 ABLIM3O94929 683 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 APOL3O95236 402 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 FOSP01100 380 aaPredicted RBP5.08□□□□□ -1.6
TMOD3-207ENST00000560549 HSPA6P17066 643 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 ATP5JP18859 108 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 SCAND1P57086 179 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 TIMM10P62072 90 aa5.08□□□□□ -1.6
TMOD3-207ENST00000560549 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms