RNA–Protein interactions for RNA: ENST00000560444.1

PIF1-208, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,631 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-208ENST00000560444 CCDC188H7C350 402 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 RRM1P23921 792 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 CTNNA2P26232 953 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 HOXD10P28358 340 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 MYO1EQ12965 1108 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 NBPF20Q3BBV1 942 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 TMEM40Q8WWA1 233 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 CD101Q93033 1021 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 CNTN3Q9P232 1028 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 PIN4Q9Y237 131 aaKnown RBP25.32■■□□□ 1.64
PIF1-208ENST00000560444 SCINQ9Y6U3 715 aa25.32■■□□□ 1.64
PIF1-208ENST00000560444 CCDC66A2RUB6 948 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 M0QZ92 97 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 PGK1P00558 417 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 SLC1A1P43005 524 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 MAP9Q49MG5 647 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 C8orf74Q6P047 294 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 CXCL17Q6UXB2 119 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 PASD1Q8IV76 773 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 BEST2Q8NFU1 509 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 CD99L2Q8TCZ2 262 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 ZSWIM1Q9BR11 485 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 LHX5Q9H2C1 402 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 CHORDC1Q9UHD1 332 aaPredicted RBP25.31■■□□□ 1.64
PIF1-208ENST00000560444 CEP83Q9Y592 693 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 THSD7BQ9C0I4 1608 aa25.31■■□□□ 1.64
PIF1-208ENST00000560444 TMEM110-MUSTN1A8MSY1 372 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 ADAMTS4O75173 837 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 CALB1P05937 261 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 MMP8P22894 467 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 RNASE9P60153 205 aaKnown RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 PTP4A2Q12974 167 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 LONRF2Q1L5Z9 754 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 ZNF394Q53GI3 561 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 BEND6Q5SZJ8 279 aaPredicted RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 PLEKHA7Q6IQ23 1121 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 RPAINQ86UA6 219 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 SESTD1Q86VW0 696 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 XPNPEP3Q9NQH7 507 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 LCMT1Q9UIC8 334 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 NOC2LQ9Y3T9 749 aaKnown RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 MYO1FO00160 1098 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 CILPO75339 1184 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 BRD2P25440 801 aaKnown RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 PEX5P50542 639 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 RAD23BP54727 409 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 MRPS6P82932 125 aaKnown RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 KLHDC9Q8NEP7 349 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 C11orf70Q9BRQ4 267 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 SDCBP2Q9H190 292 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 PARVAQ9NVD7 372 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 RNF216Q9NWF9 866 aaPredicted RBP25.3■■□□□ 1.64
PIF1-208ENST00000560444 ANAPC7Q9UJX3 599 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 PCDHA3Q9Y5H8 950 aa25.3■■□□□ 1.64
PIF1-208ENST00000560444 SPOPO43791 374 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 SEC31AO94979 1220 aaKnown RBP25.29■■□□□ 1.64
PIF1-208ENST00000560444 CST5P28325 142 aaPredicted RBP25.29■■□□□ 1.64
PIF1-208ENST00000560444 CTNNA1P35221 906 aaKnown RBP25.29■■□□□ 1.64
PIF1-208ENST00000560444 CDH8P55286 799 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 TRIM32Q13049 653 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 PPP2R5EQ16537 467 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 XKR4Q5GH76 650 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 UBXN11Q5T124 520 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 CCNI2Q6ZMN8 369 aaPredicted RBP25.29■■□□□ 1.64
PIF1-208ENST00000560444 LRRC52Q8N7C0 313 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 TMEM176AQ96HP8 235 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 OGFRQ9NZT2 677 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 STIM2Q9P246 746 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 KIAA1257Q9ULG3 409 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 UBQLN1Q9UMX0 589 aaKnown RBP25.29■■□□□ 1.64
PIF1-208ENST00000560444 TRPV2Q9Y5S1 764 aa25.29■■□□□ 1.64
PIF1-208ENST00000560444 KRIT1O00522 736 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 XPOTO43592 962 aaKnown RBP25.28■■□□□ 1.64
PIF1-208ENST00000560444 HSPA6P17066 643 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 INCA1Q0VD86 236 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 MAMLD1Q13495 774 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 DCAF12L1Q5VU92 463 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 MMS22LQ6ZRQ5 1243 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 WHAMMQ8TF30 809 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 TFAP2BQ92481 460 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 RNPC3Q96LT9 517 aaKnown RBP25.28■■□□□ 1.64
PIF1-208ENST00000560444 ZMAT2Q96NC0 199 aaKnown RBP25.28■■□□□ 1.64
PIF1-208ENST00000560444 SMYD3Q9H7B4 428 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 FAM53CQ9NYF3 392 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 SRRDQ9UH36 339 aa25.28■■□□□ 1.64
PIF1-208ENST00000560444 BARX2Q9UMQ3 279 aaPredicted RBP25.28■■□□□ 1.64
PIF1-208ENST00000560444 RECQL4O94761 1208 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 CD4P01730 458 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 RAP1GAPP47736 663 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 GUCY2FP51841 1108 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 GDF6Q6KF10 455 aaPredicted RBP25.27■■□□□ 1.64
PIF1-208ENST00000560444 SLC4A11Q8NBS3 891 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 ALG3Q92685 438 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 BTBD6Q96KE9 485 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 KRT12Q99456 494 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 NXF3Q9H4D5 531 aaKnown RBP25.27■■□□□ 1.64
PIF1-208ENST00000560444 L1RE1Q9UN81 338 aa25.27■■□□□ 1.64
PIF1-208ENST00000560444 TLR3O15455 904 aaKnown RBP25.26■■□□□ 1.63
PIF1-208ENST00000560444 PRKAR2AP13861 404 aaKnown RBP25.26■■□□□ 1.63
PIF1-208ENST00000560444 KCNE1P15382 129 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms