RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 RNF149Q8NC42 400 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 OR2W6PQ8NHA6 318 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ATL2Q8NHH9 583 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CCHCR1Q8TD31 782 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 ZNF606Q8WXB4 792 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CNKSR2Q8WXI2 1034 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CDCA5Q96FF9 252 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 SNF8Q96H20 258 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 L3MBTL3Q96JM7 780 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 TCHPQ9BT92 498 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 PTPRHQ9HD43 1115 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 PRMT7Q9NVM4 692 aaPredicted RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 DDX56Q9NY93 547 aaKnown RBP8.59□□□□□ -1.03
SMAD3-212ENST00000559937 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 STRIP2Q9ULQ0 834 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 CEP83Q9Y592 693 aa8.59□□□□□ -1.03
SMAD3-212ENST00000559937 TCRBV5S1A1TA0A578 114 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 RBM47A0AV96 593 aaKnown RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MYO1CO00159 1063 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 NDUFAB1O14561 156 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TLR3O15455 904 aaKnown RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MED7O43513 233 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 FAM107AO95990 144 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MCF2P10911 925 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 POLR2BP30876 1174 aaKnown RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 ATICP31939 592 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TNFSF9P41273 254 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 PHKA2P46019 1235 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 CCT5P48643 541 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MYL6P60660 151 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 DRP2Q13474 957 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF699Q32M78 642 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 HSDL1Q3SXM5 330 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TNFAIP8L3Q5GJ75 292 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MFSD5Q6N075 450 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 GPAT2Q6NUI2 795 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MMS22LQ6ZRQ5 1243 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TTC39CQ8N584 583 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 DNAJC5GQ8N7S2 189 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 CCDC89Q8N998 374 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MYCBPAPQ8TBZ2 947 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 SPATA33Q96N06 139 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 BCO2Q9BYV7 579 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 OSBPL8Q9BZF1 889 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TRIM7Q9C029 511 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 MTMR12Q9C0I1 747 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 CENPHQ9H3R5 247 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 ASB7Q9H672 318 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 VRTNQ9H8Y1 702 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 VTA1Q9NP79 307 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 CISHQ9NSE2 258 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 ERAP1Q9NZ08 941 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 WDR35Q9P2L0 1181 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 CHORDC1Q9UHD1 332 aaPredicted RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 NOVA2Q9UNW9 492 aaKnown RBP8.58□□□□□ -1.04
SMAD3-212ENST00000559937 SLC45A1Q9Y2W3 748 aa8.58□□□□□ -1.04
SMAD3-212ENST00000559937 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 C5orf60A6NFR6 353 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 RGS16O15492 202 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 RIPK2O43353 540 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TRAPPC3O43617 180 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TCEA3O75764 348 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 C22orf31O95567 290 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CST3P01034 146 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 GH1P01241 217 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CALCAP01258 141 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CFHP08603 1231 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TXNP10599 105 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ATF2P15336 505 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 IVDP26440 423 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ATP5DP30049 168 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 HPDP32754 393 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 MMP13P45452 471 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 KCNJ1P48048 391 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 TAS2R40P59535 323 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 MAGOHP61326 146 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 CCNA1P78396 465 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 GUCY1A3Q02108 690 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 MBTD1Q05BQ5 628 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 SNAPC2Q13487 334 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 SLC29A2Q14542 456 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ODF2Q5BJF6 829 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 PPP1R15BQ5SWA1 713 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 LDLRAD1Q5T700 205 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 EFCAB12Q6NXP0 572 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 DNAJC24Q6P3W2 148 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 POLNQ7Z5Q5 900 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 YTHDF3Q7Z739 585 aaKnown RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ZNF467Q7Z7K2 595 aaPredicted RBP8.57□□□□□ -1.04
SMAD3-212ENST00000559937 ZBTB33Q86T24 672 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 NLRP14Q86W24 1093 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 NT5DC4Q86YG4 428 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 RHPN2Q8IUC4 686 aa8.57□□□□□ -1.04
SMAD3-212ENST00000559937 RELL1Q8IUW5 271 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms