RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 YWHAHQ04917 246 aaPredicted RBP21■□□□□ 0.95
SHF-205ENST00000559566 PPP3CAQ08209 521 aa21■□□□□ 0.95
SHF-205ENST00000559566 SMAD4Q13485 552 aaKnown RBP21■□□□□ 0.95
SHF-205ENST00000559566 SV2CQ496J9 727 aa21■□□□□ 0.95
SHF-205ENST00000559566 TJAP1Q5JTD0 557 aa21■□□□□ 0.95
SHF-205ENST00000559566 ZNF280DQ6N043 979 aa21■□□□□ 0.95
SHF-205ENST00000559566 OR10T2Q8NGX3 314 aa21■□□□□ 0.95
SHF-205ENST00000559566 NECAB3Q96P71 396 aaPredicted RBP21■□□□□ 0.95
SHF-205ENST00000559566 TSG101Q99816 390 aa21■□□□□ 0.95
SHF-205ENST00000559566 FBXW11Q9UKB1 542 aa21■□□□□ 0.95
SHF-205ENST00000559566 L1RE1Q9UN81 338 aa21■□□□□ 0.95
SHF-205ENST00000559566 USP15Q9Y4E8 981 aaPredicted RBP21■□□□□ 0.95
SHF-205ENST00000559566 TSC2P49815 1807 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 GOLGA6L22H0YM25 854 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 H7C4K7 107 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 CETN3O15182 167 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 HCRTO43612 131 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 VNN2O95498 520 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 PNPLA4P41247 253 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 MCCD1P59942 119 aaPredicted RBP20.99■□□□□ 0.95
SHF-205ENST00000559566 MYL6P60660 151 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 LRRC63Q05C16 580 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 AAK1Q2M2I8 961 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 OVOS1Q6IE37 1185 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 TMC5Q6UXY8 1006 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 OSTM1Q86WC4 334 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 KREMEN2Q8NCW0 462 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 SUSD6Q92537 303 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 HPDLQ96IR7 371 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 MKNK1Q9BUB5 465 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 XYLT2Q9H1B5 865 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 DZANK1Q9NVP4 752 aa20.99■□□□□ 0.95
SHF-205ENST00000559566 SRGAP2BP0DMP2 458 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 HOXB8P17481 243 aaPredicted RBP20.98■□□□□ 0.95
SHF-205ENST00000559566 PAX3P23760 479 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 CDR1P51861 262 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 FKBP3Q00688 224 aaKnown RBP20.98■□□□□ 0.95
SHF-205ENST00000559566 STIM1Q13586 685 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 C15orf39Q6ZRI6 1047 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 INTS8Q75QN2 995 aaKnown RBP20.98■□□□□ 0.95
SHF-205ENST00000559566 SV2AQ7L0J3 742 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 PDCL2Q8N4E4 241 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 GDAP2Q9NXN4 497 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 SNX9Q9Y5X1 595 aa20.98■□□□□ 0.95
SHF-205ENST00000559566 LRRN2O75325 713 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 ABLIM3O94929 683 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 SEC24AO95486 1093 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 PPP1R2P41236 205 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 GCLMP48507 274 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 PAK1Q13153 545 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 BIRC3Q13489 604 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 SOWAHAQ2M3V2 549 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 DPCR1Q3MIW9 517 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 ZACNQ401N2 412 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 RBM43Q6ZSC3 357 aaKnown RBP20.97■□□□□ 0.95
SHF-205ENST00000559566 LIMS2Q7Z4I7 341 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 USP37Q86T82 979 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 ZNF707Q96C28 371 aaPredicted RBP20.97■□□□□ 0.95
SHF-205ENST00000559566 ADAM7Q9H2U9 754 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 SFXN1Q9H9B4 322 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 POLIQ9UNA4 740 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 NME7Q9Y5B8 376 aa20.97■□□□□ 0.95
SHF-205ENST00000559566 C1RP00736 705 aa20.96■□□□□ 0.95
SHF-205ENST00000559566 EPB41P11171 864 aaKnown RBP20.96■□□□□ 0.95
SHF-205ENST00000559566 SMAD2Q15796 467 aaKnown RBP20.96■□□□□ 0.95
SHF-205ENST00000559566 CCDC142Q17RM4 750 aa20.96■□□□□ 0.95
SHF-205ENST00000559566 RNF19BQ6ZMZ0 732 aa20.96■□□□□ 0.95
SHF-205ENST00000559566 CRISPLD1Q9H336 500 aa20.96■□□□□ 0.95
SHF-205ENST00000559566 MMRN2Q9H8L6 949 aa20.96■□□□□ 0.95
SHF-205ENST00000559566 SLC16A3O15427 465 aaKnown RBP20.95■□□□□ 0.94
SHF-205ENST00000559566 PHACTR2O75167 634 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 ZMYND10O75800 440 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 C8AP07357 584 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 KRT13P13646 458 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 AP3M2P53677 418 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 NCOA4Q13772 614 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 LRRTM3Q86VH5 581 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 ZNF461Q8TAF7 563 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 ADAMTS19Q8TE59 1207 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 HDAC7Q8WUI4 952 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 KBTBD7Q8WVZ9 684 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 PGLYRP2Q96PD5 576 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 PLEKHA4Q9H4M7 779 aa20.95■□□□□ 0.94
SHF-205ENST00000559566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHF-205ENST00000559566 VCANP13611 3396 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 CCDC195A0A1B0GUA6 201 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 OR6C75A6NL08 312 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 IKBKBO14920 756 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 PAPLNO95428 1278 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 STAU1O95793 577 aaKnown RBP20.94■□□□□ 0.94
SHF-205ENST00000559566 HLA-DRAP01903 254 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 CPB1P15086 417 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 NLRP12P59046 1061 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 ENPEPQ07075 957 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 MYO1EQ12965 1108 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 TRPC3Q13507 836 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 PUS10Q3MIT2 529 aaKnown RBP20.94■□□□□ 0.94
SHF-205ENST00000559566 SPOPLQ6IQ16 392 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 FOXR2Q6PJQ5 311 aa20.94■□□□□ 0.94
SHF-205ENST00000559566 GPR149Q86SP6 731 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms