RNA–Protein interactions for RNA: ENST00000558659.5

CCDC33-205, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 2,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-205ENST00000558659 CSPG5O95196 566 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 HTRA4P83105 476 aaPredicted RBP13.43□□□□□ -0.26
CCDC33-205ENST00000558659 DRAP1Q14919 205 aaPredicted RBP13.43□□□□□ -0.26
CCDC33-205ENST00000558659 SOWAHAQ2M3V2 549 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 WDR44Q5JSH3 913 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 SPOUT1Q5T280 376 aaKnown RBP13.43□□□□□ -0.26
CCDC33-205ENST00000558659 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 TWNKQ96RR1 684 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
CCDC33-205ENST00000558659 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 PLCB1Q9NQ66 1216 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 MTUS1Q9ULD2 1270 aa13.43□□□□□ -0.26
CCDC33-205ENST00000558659 LRRC53A6NM62 1247 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 ALDH2P05091 517 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 LMO2P25791 158 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 SSTR3P32745 418 aaPredicted RBP13.42□□□□□ -0.26
CCDC33-205ENST00000558659 TAF6P49848 677 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 CUL2Q13617 745 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 ZNF667Q5HYK9 610 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 LRRC43Q8N309 656 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 SENP8Q96LD8 212 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 VN1R3Q9BXE9 311 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 L1RE1Q9UN81 338 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 ITIH6Q6UXX5 1313 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 CCDC66A2RUB6 948 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 HOXA2O43364 376 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 XPOTO43592 962 aaKnown RBP13.42□□□□□ -0.26
CCDC33-205ENST00000558659 ACO1P21399 889 aaKnown RBP13.42□□□□□ -0.26
CCDC33-205ENST00000558659 CDC25BP30305 580 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 KRT9P35527 623 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 USP8P40818 1118 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 NIF3L1Q9GZT8 377 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 FAN1Q9Y2M0 1017 aa13.42□□□□□ -0.26
CCDC33-205ENST00000558659 CYB561D2O14569 222 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 SKILP12757 684 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
CCDC33-205ENST00000558659 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 KCNT2Q6UVM3 1135 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 CACNA2D4Q7Z3S7 1137 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 LRRC52Q8N7C0 313 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 KBTBD7Q8WVZ9 684 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 RAD9AQ99638 391 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 IMPG2Q9BZV3 1241 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 CERS4Q9HA82 394 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 CISHQ9NSE2 258 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 CAPN11Q9UMQ6 739 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 YBX2Q9Y2T7 364 aaKnown RBP13.41□□□□□ -0.26
CCDC33-205ENST00000558659 INSL6Q9Y581 213 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 C5orf42Q9H799 3197 aa13.41□□□□□ -0.26
CCDC33-205ENST00000558659 TADA2AO75478 443 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 GFPT2O94808 682 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CA3P07451 260 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 PLEKP08567 350 aaPredicted RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 PDGFRBP09619 1106 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 ATICP31939 592 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 JAM2P57087 298 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 WHAMMQ8TF30 809 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 RSPH1Q8WYR4 309 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 MRPL9Q9BYD2 267 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 GEMIN8Q9NWZ8 242 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CEP72Q9P209 647 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 F8VZ95 297 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CYP26A1O43174 497 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 MFAP3LO75121 409 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 ATP2C2O75185 946 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 TNNC1P63316 161 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CBX1P83916 185 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 KIAA0319Q5VV43 1072 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 WDR59Q6PJI9 974 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 PPFIBP1Q86W92 1011 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CEP57Q86XR8 500 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 TSPAN18Q96SJ8 248 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CHP1Q99653 195 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 BCO2Q9BYV7 579 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
CCDC33-205ENST00000558659 LUC7L2Q9Y383 392 aaKnown RBP13.4□□□□□ -0.26
CCDC33-205ENST00000558659 CFHP08603 1231 aa13.39□□□□□ -0.27
CCDC33-205ENST00000558659 KRT5P13647 590 aa13.39□□□□□ -0.27
CCDC33-205ENST00000558659 AARSP49588 968 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC33-205ENST00000558659 GCNT1Q02742 428 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms