RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 ZNF280BQ86YH2 543 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 APPL2Q8NEU8 664 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 MMS19Q96T76 1030 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 ARID3AQ99856 593 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.91■□□□□ 0.148e-7■■■■■ 32.7
VPS18-202ENST00000558474 COLEC11Q9BWP8 271 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 NRDE2Q9H7Z3 1164 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■■■■■ 149.1
VPS18-202ENST00000558474 KIAA1257Q9ULG3 409 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 BARX2Q9UMQ3 279 aaPredicted RBP15.91■□□□□ 0.14
VPS18-202ENST00000558474 POLIQ9UNA4 740 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 PCDHB4Q9Y5E5 795 aa15.91■□□□□ 0.14
VPS18-202ENST00000558474 M0QZQ0 153 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 SPTLC1O15269 473 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 CILPO75339 1184 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 B3GAT3O94766 335 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 UPP2O95045 317 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 ODC1P11926 461 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 CLCN1P35523 988 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 CYLC1P35663 651 aaPredicted RBP15.9■□□□□ 0.14
VPS18-202ENST00000558474 DEFB103AP81534 67 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 HTRA4P83105 476 aaPredicted RBP15.9■□□□□ 0.14
VPS18-202ENST00000558474 E4F1Q66K89 784 aaPredicted RBP15.9■□□□□ 0.14
VPS18-202ENST00000558474 TMEM270Q6UE05 265 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 CCDC42Q96M95 316 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 KCNF1Q9H3M0 494 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 ARHGAP20Q9P2F6 1191 aa15.9■□□□□ 0.14
VPS18-202ENST00000558474 ZBBXA8MT70 800 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 CYB561D2O14569 222 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 GJB5O95377 273 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 CYP11A1P05108 521 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 WEE2P0C1S8 567 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 KRT5P13647 590 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 SYN1P17600 705 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 TYMPP19971 482 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 WARSP23381 471 aaKnown RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 USP8P40818 1118 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 OR1G1P47890 313 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 LHX1P48742 406 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 PDE6CP51160 858 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 ELAVL2Q12926 359 aaKnown RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 BMS1Q14692 1282 aaKnown RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 SOWAHAQ2M3V2 549 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 RASIP1Q5U651 963 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 DSTYKQ6XUX3 929 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 SCARA5Q6ZMJ2 495 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 RBBP8NLQ8NC74 664 aaPredicted RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 SUSD3Q96L08 255 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 SENP8Q96LD8 212 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 HAUS4Q9H6D7 363 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 SMYD3Q9H7B4 428 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 NHEJ1Q9H9Q4 299 aaPredicted RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 STK39Q9UEW8 545 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
VPS18-202ENST00000558474 FAN1Q9Y2M0 1017 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 INSL6Q9Y581 213 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 SLC4A7Q9Y6M7 1214 aa15.89■□□□□ 0.13
VPS18-202ENST00000558474 RBAK-RBAKDNI3L0D1 243 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 GABRDO14764 452 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 NRP1O14786 923 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CYP26A1O43174 497 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CAPN15O75808 1086 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 GALTP07902 379 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CYP11B1P15538 503 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 ALDH7A1P49419 539 aaKnown RBP15.88■□□□□ 0.13
VPS18-202ENST00000558474 EPHB4P54760 987 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 ARID5AQ03989 594 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 STILQ15468 1287 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 ASTE1Q2TB18 679 aaPredicted RBP15.88■□□□□ 0.13
VPS18-202ENST00000558474 TDRD12Q587J7 1177 aaKnown RBP15.88■□□□□ 0.13
VPS18-202ENST00000558474 PPP1R2P3Q6NXS1 205 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CD300LGQ6UXG3 332 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 METTL23Q86XA0 190 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 TMEM130Q8N3G9 435 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 C3orf58Q8NDZ4 430 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 EPS8L1Q8TE68 723 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 ELMO3Q96BJ8 720 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 TMEM176AQ96HP8 235 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CHP1Q99653 195 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 PAAF1Q9BRP4 392 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 NT5C1AQ9BXI3 368 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 DEF6Q9H4E7 631 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 CWH43Q9H720 699 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 DNAJB4Q9UDY4 337 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 ADAM28Q9UKQ2 775 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 PCDHB8Q9UN66 801 aa15.88■□□□□ 0.13
VPS18-202ENST00000558474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
VPS18-202ENST00000558474 TSC2P49815 1807 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 EIF3CLB5ME19 914 aaKnown RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 SYN3O14994 580 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 MED7O43513 233 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 TADA2AO75478 443 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 KIF4AO95239 1232 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 LCA5LO95447 670 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 LAG3P18627 525 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 CD58P19256 250 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 GNL1P36915 607 aaPredicted RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 GATMP50440 423 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 CDH8P55286 799 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms