RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 CEP57L1Q8IYX8 460 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 TMEM105Q8N8V8 129 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 GPR152Q8TDT2 470 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 C7orf25Q9BPX7 421 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 RPP25Q9BUL9 199 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 MAGEF1Q9HAY2 307 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 GDE1Q9NZC3 331 aa13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZNF233A6NK53 670 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 KPNA7A9QM74 516 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 MYL4P12829 197 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 AFMP43652 599 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 EPHB3P54753 998 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 GPC5P78333 572 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 GPR17Q13304 367 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 PLD1Q13393 1074 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 SLC5A9Q2M3M2 681 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 FAM26FQ5R3K3 315 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 RESP18Q5W5W9 173 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 BRSK2Q8IWQ3 736 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 GPD1LQ8N335 351 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 CSGALNACT2Q8N6G5 542 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 ATAD1Q8NBU5 361 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZSWIM2Q8NEG5 633 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 BLZF1Q9H2G9 400 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 AVENQ9NQS1 362 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 SLC2A4RGQ9NR83 387 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 AGAP1Q9UPQ3 857 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 SLC27A5Q9Y2P5 690 aa13.36□□□□□ -0.27
CDC42BPB-202ENST00000558321 KRBA1A5PL33 1030 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 KIAA0391O15091 583 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 PI15O43692 258 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 ITGB3P05106 788 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 CYP11A1P05108 521 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 KRT19P08727 400 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 TMEM191BP0C7N4 346 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 NPR3P17342 541 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 CEBPBP17676 345 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 POLR2BP30876 1174 aaKnown RBP13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 PNPLA4P41247 253 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 TCF15Q12870 199 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 WSCD1Q658N2 575 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 CENPPQ6IPU0 288 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 CNNM4Q6P4Q7 775 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 ATOH1Q92858 354 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 KIAA1586Q9HCI6 787 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 CEP72Q9P209 647 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 YIPF1Q9Y548 306 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 MUC6Q6W4X9 2439 aa13.35□□□□□ -0.27
CDC42BPB-202ENST00000558321 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 H0Y858 1186 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 EIF3DO15371 548 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 HUS1O60921 280 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 MICAL2O94851 1124 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 AOC1P19801 751 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 CASP1P29466 404 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 CDR1P51861 262 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 WNT7BP56706 349 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 RBP5P82980 135 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 PFKPQ01813 784 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 BFSP1Q12934 665 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 NELFCDQ8IXH7 590 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 RDH13Q8NBN7 331 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZNF507Q8TCN5 953 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 SHDQ96IW2 340 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ANKRD36BP1Q96IX9 119 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 SLITRK6Q9H5Y7 841 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 TBC1D17Q9HA65 648 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZFP14Q9HCL3 533 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 HSPBP1Q9NZL4 362 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 SERTAD1Q9UHV2 236 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 ZDBF2Q9HCK1 2354 aa13.34□□□□□ -0.27
CDC42BPB-202ENST00000558321 PDCD11Q14690 1871 aaKnown RBP13.33□□□□□ -0.27
CDC42BPB-202ENST00000558321 ECI2O75521 394 aa13.33□□□□□ -0.28
CDC42BPB-202ENST00000558321 VNN2O95498 520 aa13.33□□□□□ -0.28
CDC42BPB-202ENST00000558321 TNNC2P02585 160 aa13.33□□□□□ -0.28
CDC42BPB-202ENST00000558321 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms