RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 APBB1IPQ7Z5R6 666 aaPredicted RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.58□□□□□ -1.04
RTF1-205ENST00000558298 TMEM161BQ8NDZ6 487 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 DEPTORQ8TB45 409 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 LZICQ8WZA0 190 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 P2RX5Q93086 422 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 DNAJC19Q96DA6 116 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 TBC1D31Q96DN5 1066 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 TGS1Q96RS0 853 aaKnown RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 GAS2L1Q99501 681 aaPredicted RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 REEP2Q9BRK0 252 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 C17orf80Q9BSJ5 609 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 STRA6Q9BX79 667 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 MRPL9Q9BYD2 267 aaKnown RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 EDEM3Q9BZQ6 932 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 TMEM117Q9H0C3 514 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PTPRHQ9HD43 1115 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PLCB1Q9NQ66 1216 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 RNF19AQ9NV58 838 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 CAPN11Q9UMQ6 739 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PIN4Q9Y237 131 aaKnown RBP8.58□□□□□ -1.04
RTF1-205ENST00000558298 CUL9Q8IWT3 2517 aa8.58□□□□□ -1.04
RTF1-205ENST00000558298 PLXNA4Q9HCM2 1894 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 TRIP11Q15643 1979 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 LRRIQ4A6NIV6 560 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 INO80B-WBP1J3KQ70 363 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 MYO1FO00160 1098 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 WFS1O76024 890 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 VIMP08670 466 aaKnown RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 GBP1P32455 592 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 KRT9P35527 623 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 CCNG1P51959 295 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 PEX3P56589 373 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 MRPS35P82673 323 aaKnown RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 GTF2BQ00403 316 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 AMPD3Q01432 767 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 ROR2Q01974 943 aaKnown RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 COL19A1Q14993 1142 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 DCAF4L1Q3SXM0 396 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 LONRF3Q496Y0 759 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 TWF2Q6IBS0 349 aaKnown RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 SLC27A1Q6PCB7 646 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 SLC30A9Q6PML9 568 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 SV2BQ7L1I2 683 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 GPBP1Q86WP2 473 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 MAP4K3Q8IVH8 894 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 HACE1Q8IYU2 909 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 IQCKQ8N0W5 287 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 LRRC43Q8N309 656 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 RASSF8Q8NHQ8 419 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 TMEM174Q8WUU8 243 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 ATRIPQ8WXE1 791 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 TATDN2Q93075 761 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 PGBD4Q96DM1 585 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 CYFIP2Q96F07 1278 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 YME1L1Q96TA2 773 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 CCDC28BQ9BUN5 200 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 TRIM9Q9C026 710 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 CENPHQ9H3R5 247 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 KMT5AQ9NQR1 393 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 MAGEC2Q9UBF1 373 aaPredicted RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 STK39Q9UEW8 545 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 GUCA1BQ9UMX6 200 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 RPL26L1Q9UNX3 145 aaKnown RBP8.57□□□□□ -1.04
RTF1-205ENST00000558298 TNFSF13BQ9Y275 285 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 C15orf41Q9Y2V0 281 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 PCDHB7Q9Y5E2 793 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 ANK1P16157 1881 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 BRWD1Q9NSI6 2320 aa8.57□□□□□ -1.04
RTF1-205ENST00000558298 UBE4BO95155 1302 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 MYMKA6NI61 221 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 E7EVH7 732 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 H3BNC9 293 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 TRAPPC3O43617 180 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 TBCAO75347 108 aaKnown RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 TOM1L1O75674 476 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PRKCBP05771 671 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 ZBED6P86452 979 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 UBE3AQ05086 875 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 IFT88Q13099 833 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 PRPF4BQ13523 1007 aaKnown RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 CUL4BQ13620 913 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 SLC5A9Q2M3M2 681 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 EPC2Q52LR7 807 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 TAS1R3Q7RTX0 852 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 APTXQ7Z2E3 356 aaKnown RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 HOOK3Q86VS8 718 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 LMNTD2Q8IXW0 634 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 DRAXINQ8NBI3 349 aaPredicted RBP8.56□□□□□ -1.04
RTF1-205ENST00000558298 SPATA4Q8NEY3 305 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 GDPD5Q8WTR4 605 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 ARNTL2Q8WYA1 636 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 DDX12PQ92771 950 aa8.56□□□□□ -1.04
RTF1-205ENST00000558298 SPDL1Q96EA4 605 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms