RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TANGO2Q6ICL3 276 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 GALNT17Q6IS24 598 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 KRT25Q7Z3Z0 450 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NEK8Q86SG6 692 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 TPH2Q8IWU9 490 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NETO1Q8TDF5 533 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 IRF7Q92985 503 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 RNF34Q969K3 372 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 MCRS1Q96EZ8 462 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NELL2Q99435 816 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NFKBIZQ9BYH8 718 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 POLR3FQ9H1D9 316 aaPredicted RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 CHRDQ9H2X0 955 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 GDE1Q9NZC3 331 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 RAB23Q9ULC3 237 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 NDRG2Q9UN36 371 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 KCNJ14Q9UNX9 436 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 MRPS17Q9Y2R5 130 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 MRPS23Q9Y3D9 190 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 GPSM3Q9Y4H4 160 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 ZZEF1O43149 2961 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 CNOT1A5YKK6 2376 aaKnown RBP6.46□□□□□ -1.38
VPS33B-207ENST00000557470 BAHCC1Q9P281 2608 aa6.46□□□□□ -1.38
VPS33B-207ENST00000557470 ATRXP46100 2492 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 VWA8A3KMH1 1905 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 CPLX1O14810 134 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TBX3O15119 743 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PEX14O75381 377 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 CDC45O75419 566 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 RECQL4O94761 1208 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 SLITRK3O94933 977 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 LYPLA2O95372 231 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 THP07101 528 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 RETP07949 1114 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 GCFC2P16383 781 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 FGFR3P22607 806 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TKTP29401 623 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 HSPA4P34932 840 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 NRLP54845 237 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 RAB15P59190 212 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 DPYDQ12882 1025 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 ELAVL2Q12926 359 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TOB2Q14106 344 aaPredicted RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 UVSSAQ2YD98 709 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 GLIPR1L2Q4G1C9 344 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 FAM78AQ5JUQ0 283 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PPP4R3AQ6IN85 833 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PDXDC1Q6P996 788 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PRR23BQ6ZRT6 265 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 Q6ZVU0 165 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TAS1R3Q7RTX0 852 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 CELF5Q8N6W0 485 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 DNASE1L2Q92874 299 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 ELSPBP1Q96BH3 223 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TCEAL4Q96EI5 215 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 HSD17B14Q9BPX1 270 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PDZD7Q9H5P4 517 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 BRD9Q9H8M2 597 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 GPRC5CQ9NQ84 441 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 METTL5Q9NRN9 209 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 TMPRSS4Q9NRS4 437 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 SEMA4GQ9NTN9 838 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 PGPEP1Q9NXJ5 209 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 SNTG2Q9NY99 539 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 MTRRQ9UBK8 725 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 RALYQ9UKM9 306 aaKnown RBP6.45□□□□□ -1.38
VPS33B-207ENST00000557470 CDY1Q9Y6F8 540 aa6.45□□□□□ -1.38
VPS33B-207ENST00000557470 ZFYVE26Q68DK2 2539 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 FAM208BQ5VWN6 2430 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 A0A087WWV3 80 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 ARHGEF37A1IGU5 675 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 LRRIQ4A6NIV6 560 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 I3L4J1 428 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 MAN2B1O00754 1011 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PRMT3O60678 531 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 USO1O60763 962 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 LRP3O75074 770 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 EDN1P05305 212 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 HSD3B2P26439 372 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 DNAJA1P31689 397 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CCR2P41597 374 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 RARRES1P49788 294 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 INSM1Q01101 510 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 SATB1Q01826 763 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 DMWDQ09019 674 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 SRSF5Q13243 272 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PPP2R5DQ14738 602 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CSRP2Q16527 193 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 EARS2Q5JPH6 523 aaKnown RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PRSS36Q5K4E3 855 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CDCA2Q69YH5 1023 aaPredicted RBP6.44□□□□□ -1.38
VPS33B-207ENST00000557470 CD300LGQ6UXG3 332 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PRR23CQ6ZRP0 262 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 PIK3AP1Q6ZUJ8 805 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 RTL10Q7L3V2 364 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 MAEAQ7L5Y9 396 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 NOSTRINQ8IVI9 506 aa6.44□□□□□ -1.38
VPS33B-207ENST00000557470 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms