RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KAT6BQ8WYB5 2073 aa5□□□□□ -1.61
SRP54-212ENST00000556992 F5H6K3 240 aa5□□□□□ -1.61
SRP54-212ENST00000556992 IKBKBO14920 756 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ZBTB5O15062 677 aa5□□□□□ -1.61
SRP54-212ENST00000556992 POLR2DO15514 142 aaKnown RBP5□□□□□ -1.61
SRP54-212ENST00000556992 EEF2P13639 858 aaKnown RBP5□□□□□ -1.61
SRP54-212ENST00000556992 VEGFAP15692 232 aaPredicted RBP5□□□□□ -1.61
SRP54-212ENST00000556992 MCM7P33993 719 aa5□□□□□ -1.61
SRP54-212ENST00000556992 PRPHP41219 470 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SLC1A4P43007 532 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ADCY7P51828 1080 aa5□□□□□ -1.61
SRP54-212ENST00000556992 CACNB3P54284 484 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ATP2C1P98194 919 aaPredicted RBP5□□□□□ -1.61
SRP54-212ENST00000556992 CXCL9Q07325 125 aa5□□□□□ -1.61
SRP54-212ENST00000556992 KLRC3Q07444 240 aa5□□□□□ -1.61
SRP54-212ENST00000556992 FHL2Q14192 279 aa5□□□□□ -1.61
SRP54-212ENST00000556992 IQCB1Q15051 598 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SLC35G1Q2M3R5 365 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SV2CQ496J9 727 aa5□□□□□ -1.61
SRP54-212ENST00000556992 EARS2Q5JPH6 523 aaKnown RBP5□□□□□ -1.61
SRP54-212ENST00000556992 E4F1Q66K89 784 aaPredicted RBP5□□□□□ -1.61
SRP54-212ENST00000556992 IQCEQ6IPM2 695 aa5□□□□□ -1.61
SRP54-212ENST00000556992 TCTN3Q6NUS6 607 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SARM1Q6SZW1 724 aa5□□□□□ -1.61
SRP54-212ENST00000556992 C6orf15Q6UXA7 325 aaPredicted RBP5□□□□□ -1.61
SRP54-212ENST00000556992 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5□□□□□ -1.61
SRP54-212ENST00000556992 LUZP1Q86V48 1076 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ZNF227Q86WZ6 799 aa5□□□□□ -1.61
SRP54-212ENST00000556992 PROSER1Q86XN7 944 aa5□□□□□ -1.61
SRP54-212ENST00000556992 HOMER1Q86YM7 354 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ADGRF4Q8IZF3 695 aa5□□□□□ -1.61
SRP54-212ENST00000556992 C4orf32Q8N8J7 132 aa5□□□□□ -1.61
SRP54-212ENST00000556992 TRIML1Q8N9V2 468 aa5□□□□□ -1.61
SRP54-212ENST00000556992 GMCL1P1Q8NEA9 526 aa5□□□□□ -1.61
SRP54-212ENST00000556992 DPF2Q92785 391 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SMARCE1Q969G3 411 aa5□□□□□ -1.61
SRP54-212ENST00000556992 AK8Q96MA6 479 aa5□□□□□ -1.61
SRP54-212ENST00000556992 GTPBP4Q9BZE4 634 aaKnown RBP5□□□□□ -1.61
SRP54-212ENST00000556992 TRIM5Q9C035 493 aa5□□□□□ -1.61
SRP54-212ENST00000556992 TAOK3Q9H2K8 898 aa5□□□□□ -1.61
SRP54-212ENST00000556992 SH2D4AQ9H788 454 aa5□□□□□ -1.61
SRP54-212ENST00000556992 PSTPIP2Q9H939 334 aa5□□□□□ -1.61
SRP54-212ENST00000556992 JMJD4Q9H9V9 463 aa5□□□□□ -1.61
SRP54-212ENST00000556992 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5□□□□□ -1.61
SRP54-212ENST00000556992 RIC8AQ9NPQ8 531 aa5□□□□□ -1.61
SRP54-212ENST00000556992 ATRNL1Q5VV63 1379 aa5□□□□□ -1.61
SRP54-212ENST00000556992 C10orf71Q711Q0 1435 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 VWA3AA6NCI4 1184 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 TCP10L2B9ZVM9 353 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 FOSP01100 380 aaPredicted RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 LTFP02788 710 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 MYL1P05976 194 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 TGM1P22735 817 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 MSNP26038 577 aaKnown RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 ERCC5P28715 1186 aaPredicted RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 UBA7P41226 1012 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 GLRBP48167 497 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ZNF75DP51815 510 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 GTF2A2P52657 109 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ZNF280AP59817 542 aaPredicted RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 DGCR2P98153 550 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ICA1Q05084 483 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 KCNAB2Q13303 367 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 LSAMPQ13449 338 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 TNFAIP1Q13829 316 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 PDIA5Q14554 519 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 SEPT2Q15019 361 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 POSTNQ15063 836 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 CCDC96Q2M329 555 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 SPECC1Q5M775 1068 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 BTNL9Q6UXG8 535 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 NEK8Q86SG6 692 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 DRC7Q8IY82 874 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 LRRC47Q8N1G4 583 aaKnown RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 TMEM145Q8NBT3 493 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 SPATA20Q8TB22 786 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 CHURC1Q8WUH1 139 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 CUL5Q93034 780 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 HOOK2Q96ED9 719 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 MTMR8Q96EF0 704 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 PAGE5Q96GU1 130 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 MRFAP1L1Q96HT8 127 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ZBED3Q96IU2 234 aaPredicted RBP4.99□□□□□ -1.61
SRP54-212ENST00000556992 EPSTI1Q96J88 318 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 GSDMAQ96QA5 445 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 TMEM209Q96SK2 561 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ADOQ96SZ5 270 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 JAM3Q9BX67 310 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 CUEDC2Q9H467 287 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 RMND1Q9NWS8 449 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 ADAM29Q9UKF5 820 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 PCDHA1Q9Y5I3 950 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 PCDHAC2Q9Y5I4 1007 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 DUOX1Q9NRD9 1551 aa4.99□□□□□ -1.61
SRP54-212ENST00000556992 FRMPD2Q68DX3 1309 aaPredicted RBP4.98□□□□□ -1.61
SRP54-212ENST00000556992 ARAP2Q8WZ64 1704 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 AKAP11Q9UKA4 1901 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 CLRN2A0PK11 232 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 H7C1D1 291 aa4.98□□□□□ -1.61
SRP54-212ENST00000556992 SLC26A4O43511 780 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms