RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 FAM86B2P0C5J1 330 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 SFPQP23246 707 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 CNR2P34972 360 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 CCR3P51677 355 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 UNQ6494/PRO21346Q6UXR6 183 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 TEX2Q8IWB9 1127 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 SMAP1Q8IYB5 467 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 COLGALT2Q8IYK4 626 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 GPR65Q8IYL9 337 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 TTC16Q8NEE8 873 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PGBD1Q96JS3 809 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 MBOAT7Q96N66 472 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 IER2Q9BTL4 223 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PHF20Q9BVI0 1012 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 INO80BQ9C086 356 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 RSAD1Q9HA92 442 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 HEBP1Q9NRV9 189 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 TBC1D22BQ9NU19 505 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 FNIP2Q9P278 1114 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PIN4Q9Y237 131 aaKnown RBP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PRG3Q9Y2Y8 225 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-236ENST00000556220 PCDHB2Q9Y5E7 798 aa7.69□□□□□ -1.18
ATXN3-236ENST00000556220 DOCK6Q96HP0 2047 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 A0A087WZ62 844 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 H3BRJ5 948 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 IPO5O00410 1097 aaKnown RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 MAN2B1O00754 1011 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF862O60290 1169 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 KCNK5O95279 499 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 POMCP01189 267 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CYP21A2P08686 494 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 HNRNPA1P09651 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CES1P23141 567 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CDC25BP30305 580 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 SREBF1P36956 1147 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 OR1G1P47890 313 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CXCL12P48061 93 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CD97P48960 835 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ANTXR2P58335 489 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 NTHL1P78549 312 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 DRP2Q13474 957 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 AASDHQ4L235 1098 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF654Q8IZM8 581 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ARMC10Q8N2F6 343 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 NCOA7Q8NI08 942 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ITFG1Q8TB96 612 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 EDEM1Q92611 657 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 FAM46AQ96IP4 442 aaKnown RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 KXD1Q9BQD3 176 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 FDXACB1Q9BRP7 624 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 LSM14BQ9BX40 385 aaKnown RBP7.68□□□□□ -1.18
ATXN3-236ENST00000556220 ANO3Q9BYT9 981 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 LMAN1LQ9HAT1 526 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 OSGEPQ9NPF4 335 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 RIC8AQ9NPQ8 531 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 CNTNAP2Q9UHC6 1331 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 DMXL2Q8TDJ6 3036 aa7.68□□□□□ -1.18
ATXN3-236ENST00000556220 DSPP15924 2871 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 LAMA4Q16363 1823 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 IGKV6-21A0A0C4DH24 114 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 TMEM8BA6NDV4 472 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 SRRM3A6NNA2 597 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 CHURC1-FNTBB4DL54 471 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 E7EWF7 191 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 ECI2O75521 394 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 CYP3A4P08684 503 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF806P0C7X5 589 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 RPL17P18621 184 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 MZF1P28698 734 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 FNTBP49356 437 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 CREMQ03060 361 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 RING1Q06587 406 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 DSC1Q08554 894 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 TARBP2Q15633 366 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 USP41Q3LFD5 358 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 STPG1Q5TH74 334 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 CATSPER4Q7RTX7 472 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 HEATR3Q7Z4Q2 680 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 RALYLQ86SE5 291 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF410Q86VK4 478 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 GLYCTKQ8IVS8 523 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 TMTC2Q8N394 836 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 KLHDC7BQ96G42 594 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 ZNF577Q9BSK1 485 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 COLEC11Q9BWP8 271 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 PLA2G2FQ9BZM2 168 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 UBN1Q9NPG3 1134 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 FBXW11Q9UKB1 542 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 KCNH3Q9ULD8 1083 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 NDRG2Q9UN36 371 aaKnown RBP7.67□□□□□ -1.18
ATXN3-236ENST00000556220 COL4A3Q01955 1670 aa7.67□□□□□ -1.18
ATXN3-236ENST00000556220 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms