RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ABLIM3O94929 683 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 CYP11A1P05108 521 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 HNRNPA1P09651 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTN1-217ENST00000556203 OR4Q2P0C623 313 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 CPB1P15086 417 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 ELF1P32519 619 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 UBE2HP62256 183 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 BFSP1Q12934 665 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 WSCD1Q658N2 575 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 METTL23Q86XA0 190 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 ELOA2Q8IYF1 753 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-217ENST00000556203 SPATA20Q8TB22 786 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 KHSRPQ92945 711 aaKnown RBP eCLIP16.37■□□□□ 0.21
ACTN1-217ENST00000556203 OXCT2Q9BYC2 517 aaPredicted RBP16.37■□□□□ 0.21
ACTN1-217ENST00000556203 NR2E1Q9Y466 385 aa16.37■□□□□ 0.21
ACTN1-217ENST00000556203 TTC28Q96AY4 2481 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 ANK1P16157 1881 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 C2CD4DB7Z1M9 353 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 PRRG1O14668 218 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 CCL16O15467 120 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 ATF2P15336 505 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 HOXA9P31269 272 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 CASP4P49662 377 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 ADCY1Q08828 1119 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-217ENST00000556203 TPGS2Q68CL5 300 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 RNF19BQ6ZMZ0 732 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 TRAPPC11Q7Z392 1133 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 RNF135Q8IUD6 432 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 PLEKHO2Q8TD55 490 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 GZF1Q9H116 711 aaPredicted RBP16.36■□□□□ 0.21
ACTN1-217ENST00000556203 CYP4F11Q9HBI6 524 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 WDR6Q9NNW5 1121 aaKnown RBP16.36■□□□□ 0.21
ACTN1-217ENST00000556203 AFF4Q9UHB7 1163 aaKnown RBP16.36■□□□□ 0.21
ACTN1-217ENST00000556203 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 FRMD4BQ9Y2L6 1034 aa16.36■□□□□ 0.21
ACTN1-217ENST00000556203 XYLBO75191 536 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 SEC24AO95486 1093 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 NR2F2P24468 414 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 PRCPP42785 496 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 NFIL3Q16649 462 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 RTL10Q7L3V2 364 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 PDCL2Q8N4E4 241 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 TDRD5Q8NAT2 981 aaKnown RBP16.35■□□□□ 0.21
ACTN1-217ENST00000556203 OR10T2Q8NGX3 314 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 HPDLQ96IR7 371 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 TMEM209Q96SK2 561 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 MAN1B1Q9UKM7 699 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 CLUHO75153 1309 aa16.35■□□□□ 0.21
ACTN1-217ENST00000556203 LRRIQ3A6PVS8 624 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-217ENST00000556203 HUS1O60921 280 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 POU2F2P09086 479 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 RPL13P26373 211 aaKnown RBP16.34■□□□□ 0.21
ACTN1-217ENST00000556203 ZCWPW2Q504Y3 356 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 ISM2Q6H9L7 571 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 OTOP3Q7RTS5 596 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 GRASPQ7Z6J2 395 aaPredicted RBP16.34■□□□□ 0.21
ACTN1-217ENST00000556203 TCEAL8Q8IYN2 117 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 THEM5Q8N1Q8 247 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 PARD3BQ8TEW8 1205 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 IPO9Q96P70 1041 aaKnown RBP16.34■□□□□ 0.21
ACTN1-217ENST00000556203 RTP3Q9BQQ7 232 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 EPHX3Q9H6B9 360 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 GDAP2Q9NXN4 497 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 MUTYHQ9UIF7 546 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 MAFFQ9ULX9 164 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 L1RE1Q9UN81 338 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 USTQ9Y2C2 406 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 INSL5Q9Y5Q6 135 aa16.34■□□□□ 0.21
ACTN1-217ENST00000556203 MUC3AQ02505 3323 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 PI4K2BG5E9Z4 385 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 AKAP3O75969 853 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 CST3P01034 146 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-217ENST00000556203 LRG1P02750 347 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 DLG4P78352 724 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 NTHL1P78549 312 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 GPR17Q13304 367 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 ADAM9Q13443 819 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 EDRF1Q3B7T1 1238 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 COBLL1Q53SF7 1204 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 TOP6BLQ8N6T0 577 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 ACSF2Q96CM8 615 aaPredicted RBP16.33■□□□□ 0.2
ACTN1-217ENST00000556203 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
ACTN1-217ENST00000556203 ZCWPW1Q9H0M4 648 aa16.33■□□□□ 0.2
ACTN1-217ENST00000556203 MTMR11A4FU01 709 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 DCXO43602 365 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 PHACTR2O75167 634 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 VNN2O95498 520 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 AP3M2P53677 418 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 CLDN10P78369 228 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 TWF1Q12792 350 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 BIRC3Q13489 604 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 TRPC3Q13507 836 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms