RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 FAM171A1Q5VUB5 890 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 PPP2R2DQ66LE6 453 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 SPOPLQ6IQ16 392 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 FUT10Q6P4F1 479 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 ENOSF1Q7L5Y1 443 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 GPR65Q8IYL9 337 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 TMEM86AQ8N2M4 240 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 SPPL3Q8TCT6 385 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 HASPINQ8TF76 798 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 ELMO3Q96BJ8 720 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 PCMTD1Q96MG8 357 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-215ENST00000554997 C11orf84Q9BUA3 381 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-215ENST00000554997 NUP58Q9BVL2 599 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 BCO2Q9BYV7 579 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 NIF3L1Q9GZT8 377 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 GRPEL1Q9HAV7 217 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-215ENST00000554997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.66
SYNE2-215ENST00000554997 APEX2Q9UBZ4 518 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 FBXL5Q9UKA1 691 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 DSEQ9UL01 958 aa10.93□□□□□ -0.66
SYNE2-215ENST00000554997 FNDC1Q4ZHG4 1894 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 I3L4J1 428 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 GABRDO14764 452 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 WEE2P0C1S8 567 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 ODC1P11926 461 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 RFX1P22670 979 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 GNL1P36915 607 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 ASPAP45381 313 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 LHX1P48742 406 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 KLK7P49862 253 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 ZNF75DP51815 510 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 CDH8P55286 799 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 GPM6BQ13491 265 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 KIAA0319Q5VV43 1072 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 WSCD1Q658N2 575 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 RRAGAQ7L523 313 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 METTL23Q86XA0 190 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 CEP57Q86XR8 500 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 ARHGEF19Q8IW93 802 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 PPM1KQ8N3J5 372 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 PDCL2Q8N4E4 241 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 FBXO22Q8NEZ5 403 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 NEK11Q8NG66 645 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 IQCDQ96DY2 449 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 MRFAP1L1Q96HT8 127 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 TTPALQ9BTX7 342 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 LSM14BQ9BX40 385 aaKnown RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 VN1R3Q9BXE9 311 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 NAA15Q9BXJ9 866 aaKnown RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 OXCT2Q9BYC2 517 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 EDEM3Q9BZQ6 932 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 FAM207AQ9NSI2 230 aaPredicted RBP10.92□□□□□ -0.66
SYNE2-215ENST00000554997 DNAJC12Q9UKB3 198 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 POLIQ9UNA4 740 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 SSX2IPQ9Y2D8 614 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
SYNE2-215ENST00000554997 TMEM265A0A087WTH1 108 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 H7C4K7 107 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 LILRB3O75022 631 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 CLSTN1O94985 981 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ATXN8OSP0DMR3 200 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 UCHL3P15374 230 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 WARSP23381 471 aaKnown RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 MRE11P49959 708 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 YWHAEP62258 255 aaKnown RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 APBA1Q02410 837 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 DSG1Q02413 1049 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 YWHAHQ04917 246 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 BMS1Q14692 1282 aaKnown RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 FIGNQ5HY92 759 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 SPECC1LQ69YQ0 1117 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 IQCEQ6IPM2 695 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 PDE12Q6L8Q7 609 aaKnown RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 KIAA1841Q6NSI8 718 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 PDXDC1Q6P996 788 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 GJB7Q6PEY0 223 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ANKS3Q6ZW76 656 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 SPRED2Q7Z698 418 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 UNC93AQ86WB7 457 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 VSTM4Q8IW00 320 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 VPS52Q8N1B4 723 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 THEM5Q8N1Q8 247 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 LNX1Q8TBB1 728 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-215ENST00000554997 POF1BQ8WVV4 589 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 KBTBD7Q8WVZ9 684 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ACBD6Q9BR61 282 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 HERC2P3Q9BVR0 1158 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 GANQ9H2C0 597 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 SNX25Q9H3E2 840 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 ZNF576Q9H609 170 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 CERS4Q9HA82 394 aa10.91□□□□□ -0.66
SYNE2-215ENST00000554997 CISHQ9NSE2 258 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms