RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	5.22	□□□□□ -1.57
ATXN3-231	ENST00000554994	MICAL3	Q7RTP6	2002 aa		5.22	□□□□□ -1.57
ATXN3-231	ENST00000554994	STK36	Q9NRP7	1315 aa		5.22	□□□□□ -1.57
ATXN3-231	ENST00000554994	CNOT1	A5YKK6	2376 aa	Known RBP	5.21	□□□□□ -1.57
ATXN3-231	ENST00000554994	TDRD15	B5MCY1	1934 aa	Known RBP	5.21	□□□□□ -1.57
ATXN3-231	ENST00000554994	NID2	Q14112	1375 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994		A0A1W2PP55	124 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	VPS37C	A5D8V6	355 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SRRM3	A6NNA2	597 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	C2CD4D	B7Z1M9	353 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	TAF4	O00268	1085 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	MSH4	O15457	936 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	TDP2	O95551	362 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	CXCL10	P02778	98 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	MMP1	P03956	469 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	GLI1	P08151	1106 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	CYP3A4	P08684	503 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SP9	P0CG40	484 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SMIM10L2A	P0DMW4	78 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SMIM10L2B	P0DMW5	78 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	GNAT1	P11488	350 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	KCNA2	P16389	499 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ATF7	P17544	494 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	DNAJB1	P25685	340 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	MCM7	P33993	719 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	THPO	P40225	353 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	HMGN5	P82970	282 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	CAMK1	Q14012	370 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SPECC1	Q5M775	1068 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	NCAPH2	Q6IBW4	605 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	NFRKB	Q6P4R8	1299 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZC3H14	Q6PJT7	736 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	UNQ6494/PRO21346	Q6UXR6	183 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	MIER3	Q7Z3K6	550 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	NEK8	Q86SG6	692 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	HSCB	Q8IWL3	235 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	DIS3L2	Q8IYB7	885 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	METTL13	Q8N6R0	699 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	VN1R2	Q8NFZ6	395 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	AFAP1L1	Q8TED9	768 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	TRAPPC12	Q8WVT3	735 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ASB11	Q8WXH4	323 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SUSD6	Q92537	303 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	KAT2B	Q92831	832 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	TNPO1	Q92973	898 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	KIRREL1	Q96J84	757 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	HNRNPAB	Q99729	332 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	SENP7	Q9BQF6	1050 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	KRTAP9-8	Q9BYQ0	159 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	FAM49A	Q9H0Q0	323 aa	Predicted RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	KCNK12	Q9HB15	430 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ERVK-5	Q9HDB9	667 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZNF302	Q9NR11	478 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	NRBP2	Q9NSY0	501 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	ERAP1	Q9NZ08	941 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	GABBR1	Q9UBS5	961 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	NOL7	Q9UMY1	257 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	COL4A3	Q01955	1670 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	FRMPD4	Q14CM0	1322 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994	BPTF	Q12830	3046 aa		5.21	□□□□□ -1.58
ATXN3-231	ENST00000554994		A0A087WWV3	80 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	PER2	O15055	1255 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	TREH	O43280	583 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	KIN	O60870	393 aa	Known RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	B3GALT4	O96024	378 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	CTSH	P09668	335 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	SLFN14	P0C7P3	912 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	TMEM253	P0C7T8	217 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	INSRR	P14616	1297 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	SET	Q01105	290 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ID3	Q02535	119 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	PTPN11	Q06124	597 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	EHHADH	Q08426	723 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	TMEM62	Q0P6H9	643 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ST3GAL1	Q11201	340 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	PPFIA1	Q13136	1202 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ITGB3BP	Q13352	177 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZRSR1	Q15695	479 aa	Known RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	CALCRL	Q16602	461 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	EARS2	Q5JPH6	523 aa	Known RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ALKBH2	Q6NS38	261 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	NIPA1	Q7RTP0	329 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	TPH2	Q8IWU9	490 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	FIBCD1	Q8N539	461 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	DAGLB	Q8NCG7	672 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	FBXO15	Q8NCQ5	510 aa	Predicted RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	DNAJB3	Q8WWF6	145 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZBTB10	Q96DT7	871 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	CTAGE1	Q96RT6	745 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	TCF12	Q99081	682 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	NAP1L4	Q99733	375 aa	Known RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	C16orf70	Q9BSU1	422 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	IFIH1	Q9BYX4	1025 aa	Known RBP	5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	LMAN2L	Q9H0V9	348 aa		5.2	□□□□□ -1.58
ATXN3-231	ENST00000554994	UNC45A	Q9H3U1	944 aa		5.2	□□□□□ -1.58

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