RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 GPR149Q86SP6 731 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-229ENST00000554672 CABP7Q86V35 215 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 MCATQ8IVS2 390 aaKnown RBP5.49□□□□□ -1.53
ATXN3-229ENST00000554672 C1orf210Q8IVY1 113 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 KIAA0319LQ8IZA0 1049 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 SLC39A11Q8N1S5 342 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 PHC3Q8NDX5 983 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 SLC22A17Q8WUG5 538 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 KIRREL1Q96J84 757 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 PCYT2Q99447 389 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 DUSP15Q9H1R2 295 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-229ENST00000554672 CNNM2Q9H8M5 875 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 JADE2Q9NQC1 790 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 GINS2Q9Y248 185 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 CORINQ9Y5Q5 1042 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 SPTBN4Q9H254 2564 aa5.49□□□□□ -1.53
ATXN3-229ENST00000554672 PLXNA3P51805 1871 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 UPK3BL1B0FP48 263 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 UPK3BL2E5RIL1 263 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 MEIS2O14770 477 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 CYTH3O43739 400 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 HBP1O60381 514 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 KINO60870 393 aaKnown RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 KRT1P04264 644 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 EPCAMP16422 314 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 ZSCAN20P17040 1043 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 CA8P35219 290 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 KIR3DL1P43629 444 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SLC26A2P50443 739 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 POLGP54098 1239 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 PDE1AP54750 535 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 DAB2P98082 770 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 RPL6Q02878 288 aaKnown RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 MTMR1Q13613 665 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 GRM4Q14833 912 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SEC23AQ15436 765 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 IMMTQ16891 758 aaKnown RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SLC35G1Q2M3R5 365 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 TSNAXIP1Q2TAA8 658 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 RALGPS1Q5JS13 557 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 C20orf194Q5TEA3 1177 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 ANKRD45Q5TZF3 282 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 ZNF746Q6NUN9 644 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 TMC5Q6UXY8 1006 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 VPS52Q8N1B4 723 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SLC44A3Q8N4M1 653 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SUMF1Q8NBK3 374 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 TRAPPC12Q8WVT3 735 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 RIN2Q8WYP3 895 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SECISBP2LQ93073 1101 aaKnown RBP5.48□□□□□ -1.53
ATXN3-229ENST00000554672 TMEM169Q96HH4 297 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SLC9A2Q9UBY0 812 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 UBIAD1Q9Y5Z9 338 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 GVINP1Q7Z2Y8 2422 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 TTC3P53804 2025 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 C5orf42Q9H799 3197 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-229ENST00000554672 KMT2EQ8IZD2 1858 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 TRIOO75962 3097 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 NT5C1B-RDH14C9J2C7 533 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 NARSO43776 548 aaKnown RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 DCNP07585 359 aaKnown RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 CTSAP10619 480 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SDSP20132 328 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 PBX3P40426 434 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 BCAR1P56945 870 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ACTR2P61160 394 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 LMNB2Q03252 620 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 TROAPQ12815 778 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 GAB4Q2WGN9 574 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ZNF528Q3MIS6 628 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ZNF484Q5JVG2 852 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SPECC1Q5M775 1068 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 CYP26C1Q6V0L0 522 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 DNAJC14Q6Y2X3 702 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 C15orf39Q6ZRI6 1047 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SND1Q7KZF4 910 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 DDX53Q86TM3 631 aaKnown RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 FAM228AQ86W67 206 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ECHDC2Q86YB7 292 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 BHLHE22Q8NFJ8 381 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 PIWIL2Q8TC59 973 aaKnown RBP5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ATRIPQ8WXE1 791 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 RSPH1Q8WYR4 309 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 STAMQ92783 540 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SHDQ96IW2 340 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 COX4I2Q96KJ9 171 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 ALPK1Q96QP1 1244 aa5.47□□□□□ -1.53
ATXN3-229ENST00000554672 SLC38A3Q99624 504 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms