RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PGLYRP2Q96PD5 576 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 MYADMQ96S97 322 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 RHOBTB2Q9BYZ6 727 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 MTMR12Q9C0I1 747 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 KIAA1586Q9HCI6 787 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 C11orf16Q9NQ32 467 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 HCFC1R1Q9NWW0 138 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 SORCS3Q9UPU3 1222 aa11.51□□□□□ -0.57
SHMT2-213ENST00000554600 MUC6Q6W4X9 2439 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 FAM237AA0A1B0GTK4 181 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 OR6C75A6NL08 312 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 PRR33A8MZF0 331 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 KPNA7A9QM74 516 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 TGFB1I1O43294 461 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 TBC1D4O60343 1298 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 EXOC3O60645 756 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 ABLIM3O94929 683 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 CLSTN1O94985 981 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 ZNF202O95125 648 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 OAZ2O95190 189 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 SEC24AO95486 1093 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 MYL1P05976 194 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 DLATP10515 647 aaKnown RBP11.5□□□□□ -0.57
SHMT2-213ENST00000554600 ATF2P15336 505 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 TNNI1P19237 187 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 HOXA9P31269 272 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 PNPLA4P41247 253 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 CDR1P51861 262 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 STK4Q13043 487 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 PSMD2Q13200 908 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 SNRNP35Q16560 246 aaKnown RBP11.5□□□□□ -0.57
SHMT2-213ENST00000554600 PABPC1LQ4VXU2 614 aaKnown RBP11.5□□□□□ -0.57
SHMT2-213ENST00000554600 RNF19BQ6ZMZ0 732 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 TRIM67Q6ZTA4 783 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 THEM5Q8N1Q8 247 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 C1orf127Q8N9H9 656 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 CCDC127Q96BQ5 260 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 FNBP1Q96RU3 617 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHMT2-213ENST00000554600 AFF4Q9UHB7 1163 aaKnown RBP11.5□□□□□ -0.57
SHMT2-213ENST00000554600 ITGA11Q9UKX5 1188 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 DSEQ9UL01 958 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 INSL5Q9Y5Q6 135 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 PTPRDP23468 1912 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 MIA3Q5JRA6 1907 aa11.5□□□□□ -0.57
SHMT2-213ENST00000554600 OBSL1O75147 1896 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 KMT2EQ8IZD2 1858 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 TMEM221A6NGB7 291 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 M0R296 226 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 HUS1O60921 280 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 SNRPFP62306 86 aaKnown RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 RBP5P82980 135 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 SIGLEC14Q08ET2 396 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 DUOXA2Q1HG44 320 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 WSCD1Q658N2 575 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 IQCEQ6IPM2 695 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 RTL10Q7L3V2 364 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 TCEAL8Q8IYN2 117 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 KIAA0895Q8NCT3 520 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 ST13P5Q8NFI4 369 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 ING5Q8WYH8 240 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 PBXIP1Q96AQ6 731 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 CORO1BQ9BR76 489 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 INTS13Q9NVM9 706 aa11.49□□□□□ -0.57
SHMT2-213ENST00000554600 CGNQ9P2M7 1197 aaKnown RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 DNMT3BQ9UBC3 853 aaKnown RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 MRPS23Q9Y3D9 190 aaKnown RBP11.49□□□□□ -0.57
SHMT2-213ENST00000554600 GREB1Q4ZG55 1949 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 KIF20AO95235 890 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 CYP11A1P05108 521 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 RHOP08100 348 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 LAMP2P13473 410 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 PTPN2P17706 415 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 CYP24A1Q07973 514 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 TWF1Q12792 350 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 MYO1EQ12965 1108 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 DUSP4Q13115 394 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 GPR17Q13304 367 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 MYBPC2Q14324 1141 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 SLC39A12Q504Y0 691 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 WDR49Q8IV35 697 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 UBALD2Q8IYN6 164 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 LRRC52Q8N7C0 313 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 ITFG1Q8TB96 612 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 ZNF512Q96ME7 567 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-213ENST00000554600 TMEM209Q96SK2 561 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 SMOC2Q9H3U7 446 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 KCNK12Q9HB15 430 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 IGSF9Q9P2J2 1179 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 MAPK8IP1Q9UQF2 711 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 SLC27A5Q9Y2P5 690 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 YIPF1Q9Y548 306 aa11.48□□□□□ -0.57
SHMT2-213ENST00000554600 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms