RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 PAMP19021 973 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 IGFBP6P24592 240 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 GPNMBQ14956 572 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 PTGISQ16647 500 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 SBK1Q52WX2 424 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 BMP8AQ7Z5Y6 402 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 FGD2Q7Z6J4 655 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 FAM160B2Q86V87 743 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 FBXO16Q8IX29 292 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 CLASRPQ8N2M8 674 aaKnown RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 GMCL1P1Q8NEA9 526 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 MRPL38Q96DV4 380 aaKnown RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 PAG1Q9NWQ8 432 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 MTMR4Q9NYA4 1195 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-228ENST00000554592 TNNQ9UQP3 1299 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 RAD50Q92878 1312 aa5.71□□□□□ -1.5
ATXN3-228ENST00000554592 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 A0A1W2PQC6 194 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 A0A1W2PQD8 194 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 NUAK1O60285 661 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 CXCL10P02778 98 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 MYCLP1P12525 358 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 LCP1P13796 627 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 TACR1P25103 407 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 STAT2P52630 851 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 TMEM62Q0P6H9 643 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 E4F1Q66K89 784 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 TMCO2Q7Z6W1 182 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 THNSL2Q86YJ6 484 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 OR6J1Q8NGC5 347 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 EDAQ92838 391 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 SAMD11Q96NU1 681 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 MPHOSPH6Q99547 160 aaKnown RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 TMX1Q9H3N1 280 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 IL1RAPL2Q9NP60 686 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 CNOT6Q9ULM6 557 aaKnown RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 EXOC6BQ9Y2D4 811 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 COL4A3BPQ9Y5P4 624 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 DDX49Q9Y6V7 483 aaKnown RBP5.7□□□□□ -1.5
ATXN3-228ENST00000554592 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
ATXN3-228ENST00000554592 A0A0G2JMZ2 1700 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 H3BNC9 293 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 NBNO60934 754 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 RASGRP1O95267 797 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 CRTAMO95727 393 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 ATP5JP18859 108 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 PI3P19957 117 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 MCCP23508 829 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 LTBRP36941 435 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 SLC1A4P43007 532 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 ALDH5A1P51649 535 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 DEFB103AP81534 67 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 GPM6BQ13491 265 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 BAATQ14032 418 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 INF2Q27J81 1249 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 EPC2Q52LR7 807 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 MUM1L1Q5H9M0 696 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 BICRALQ6AI39 1079 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 IQCEQ6IPM2 695 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 ZC3H14Q6PJT7 736 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 RSPO2Q6UXX9 243 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 LRRC8DQ7L1W4 858 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 LRRTM3Q86VH5 581 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 SESTD1Q86VW0 696 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 RCBTB1Q8NDN9 531 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 PRSS33Q8NF86 280 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 PLEKHO2Q8TD55 490 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 SCFD2Q8WU76 684 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 ANKS1AQ92625 1134 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 DIO2Q92813 273 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 STRBPQ96SI9 672 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 C17orf80Q9BSJ5 609 aa5.69□□□□□ -1.5
ATXN3-228ENST00000554592 TARS2Q9BW92 718 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 PUS7LQ9H0K6 701 aaKnown RBP5.69□□□□□ -1.5
ATXN3-228ENST00000554592 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms