RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 FAM84AQ96KN4 292 aa30.6■■■□□ 2.49
PCNX1-206ENST00000554292 NECTIN4Q96NY8 510 aa30.6■■■□□ 2.49
PCNX1-206ENST00000554292 POP1Q99575 1024 aaKnown RBP30.6■■■□□ 2.49
PCNX1-206ENST00000554292 APOL5Q9BWW9 433 aa30.6■■■□□ 2.49
PCNX1-206ENST00000554292 PRKAG3Q9UGI9 489 aa30.6■■■□□ 2.49
PCNX1-206ENST00000554292 SPATA31D3P0C874 917 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 CCNE1P24864 410 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 MTHFRP42898 656 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 CLDN10P78369 228 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 ROR1Q01973 937 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 RSPO2Q6UXX9 243 aaPredicted RBP30.59■■■□□ 2.49
PCNX1-206ENST00000554292 CYP26C1Q6V0L0 522 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 SPATA31D4Q6ZUB0 917 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 SUSD6Q92537 303 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 NUP62CLQ9H1M0 184 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 ZDHHC7Q9NXF8 308 aa30.59■■■□□ 2.49
PCNX1-206ENST00000554292 XIRP2A4UGR9 3374 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 LRRIQ3A6PVS8 624 aaPredicted RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 PHACTR2O75167 634 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 AKAP3O75969 853 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 EPB41P11171 864 aaKnown RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 CPB1P15086 417 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 FKBP3Q00688 224 aaKnown RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 TRPC3Q13507 836 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 CBX2Q14781 532 aaPredicted RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 TPGS2Q68CL5 300 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 C15orf39Q6ZRI6 1047 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 RTL10Q7L3V2 364 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 C12orf76Q8N812 135 aaPredicted RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 ZNF461Q8TAF7 563 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 BORCS6Q96GS4 357 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 HPDLQ96IR7 371 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 GZF1Q9H116 711 aaPredicted RBP30.58■■■□□ 2.49
PCNX1-206ENST00000554292 GDAP2Q9NXN4 497 aa30.58■■■□□ 2.49
PCNX1-206ENST00000554292 C2orf16Q68DN1 1984 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 BICDL2A1A5D9 508 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 IKBKBO14920 756 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 HUS1O60921 280 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 VAMP7P51809 220 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 ARPP19P56211 112 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 BIRC3Q13489 604 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 ATAT1Q5SQI0 421 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 TMC5Q6UXY8 1006 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 CCDC149Q6ZUS6 474 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 THEM5Q8N1Q8 247 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 PLEKHO2Q8TD55 490 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 UHRF1Q96T88 793 aaPredicted RBP30.57■■■□□ 2.48
PCNX1-206ENST00000554292 RHOBTB2Q9BYZ6 727 aa30.57■■■□□ 2.48
PCNX1-206ENST00000554292 TTC28Q96AY4 2481 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 ZMYND10O75800 440 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 ELF1P32519 619 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 UVSSAQ2YD98 709 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 ANKRD40Q6AI12 368 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 FOXR2Q6PJQ5 311 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 GPR149Q86SP6 731 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 TMEM86AQ8N2M4 240 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 SPATA18Q8TC71 538 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 MAFFQ9ULX9 164 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 SNX9Q9Y5X1 595 aa30.56■■■□□ 2.48
PCNX1-206ENST00000554292 SPTBN5Q9NRC6 3674 aaKnown RBP30.55■■■□□ 2.48
PCNX1-206ENST00000554292 WDR27A2RRH5 827 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 SLC16A3O15427 465 aaKnown RBP30.55■■■□□ 2.48
PCNX1-206ENST00000554292 ABLIM3O94929 683 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 C8AP07357 584 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 HNRNPA1P09651 372 aaKnown RBP eCLIP30.55■■■□□ 2.48
PCNX1-206ENST00000554292 BMP6P22004 513 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 HOXA9P31269 272 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 KLHL10Q6JEL2 608 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 TOP6BLQ8N6T0 577 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 ZNF516Q92618 1163 aa30.55■■■□□ 2.48
PCNX1-206ENST00000554292 SYAP1Q96A49 352 aaPredicted RBP30.55■■■□□ 2.48
PCNX1-206ENST00000554292 CCDC195A0A1B0GUA6 201 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 CD44P16070 742 aaKnown RBP30.54■■■□□ 2.48
PCNX1-206ENST00000554292 ATICP31939 592 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 PPM1LQ5SGD2 360 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 WSCD1Q658N2 575 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 DPH6Q7L8W6 267 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 ADHFE1Q8IWW8 467 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 ZC3H3Q8IXZ2 948 aaKnown RBP30.54■■■□□ 2.48
PCNX1-206ENST00000554292 NELFBQ8WX92 580 aa30.54■■■□□ 2.48
PCNX1-206ENST00000554292 PHF7Q9BWX1 381 aaPredicted RBP30.54■■■□□ 2.48
PCNX1-206ENST00000554292 AFF4Q9UHB7 1163 aaKnown RBP30.54■■■□□ 2.48
PCNX1-206ENST00000554292 TRIM49BA6NDI0 452 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 PPP1R3GB7ZBB8 358 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 RFPL2O75678 378 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 PAPLNO95428 1278 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 STAU1O95793 577 aaKnown RBP30.53■■■□□ 2.48
PCNX1-206ENST00000554292 ATF2P15336 505 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 PMS1P54277 932 aaKnown RBP30.53■■■□□ 2.48
PCNX1-206ENST00000554292 DLG4P78352 724 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 TDRD10Q5VZ19 366 aaKnown RBP30.53■■■□□ 2.48
PCNX1-206ENST00000554292 SLC7A14Q8TBB6 771 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 CTNND2Q9UQB3 1225 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 DENND4AQ7Z401 1863 aa30.53■■■□□ 2.48
PCNX1-206ENST00000554292 PRRG1O14668 218 aa30.52■■■□□ 2.48
PCNX1-206ENST00000554292 STX10O60499 249 aa30.52■■■□□ 2.48
PCNX1-206ENST00000554292 MBD3O95983 291 aa30.52■■■□□ 2.48
PCNX1-206ENST00000554292 PAK1Q13153 545 aa30.52■■■□□ 2.48
PCNX1-206ENST00000554292 PDCL2Q8N4E4 241 aa30.52■■■□□ 2.48
PCNX1-206ENST00000554292 SMG7Q92540 1137 aaKnown RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms