RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 DEPDC1BQ8WUY9 529 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
TUBB3-204ENST00000554116 CHFRQ96EP1 664 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 ZNF512Q96ME7 567 aaPredicted RBP12.61□□□□□ -0.39
TUBB3-204ENST00000554116 TMEM209Q96SK2 561 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 IER2Q9BTL4 223 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 KMT5AQ9NQR1 393 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 PCDHB8Q9UN66 801 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 YIPF1Q9Y548 306 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 IGF2RP11717 2491 aa12.61□□□□□ -0.39
TUBB3-204ENST00000554116 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 TTC26A0AVF1 554 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 SLC38A8A6NNN8 435 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 H3BQV1 296 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 FOXD2O60548 495 aaPredicted RBP12.6□□□□□ -0.39
TUBB3-204ENST00000554116 RETP07949 1114 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 CXCL8P10145 99 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 HARSP12081 509 aaKnown RBP12.6□□□□□ -0.39
TUBB3-204ENST00000554116 LRPAP1P30533 357 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 TNFSF9P41273 254 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 CXCL12P48061 93 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 CCR3P51677 355 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 GUCY2FP51841 1108 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 DUSP4Q13115 394 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 HAUS3Q68CZ6 603 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 SPEM1Q8N4L4 309 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 SNX29Q8TEQ0 813 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 PGLYRP2Q96PD5 576 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 PNMA5Q96PV4 448 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 SEMA4GQ9NTN9 838 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 MAFFQ9ULX9 164 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 NUB1Q9Y5A7 615 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 ITPR1Q14643 2758 aa12.6□□□□□ -0.39
TUBB3-204ENST00000554116 FREM2Q5SZK8 3169 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 MYBPHLA2RUH7 354 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 TM4SF5O14894 197 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 ZNF263O14978 683 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 CHADO15335 359 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 TOM1L1O75674 476 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 SOAT2O75908 522 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 ADRB2P07550 413 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 MAPTP10636 758 aaKnown RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 MCM4P33991 863 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 MCL1Q07820 350 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 GPR17Q13304 367 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 CCINQ13939 588 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 CENPPQ6IPU0 288 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 PKN3Q6P5Z2 889 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 ARID3BQ8IVW6 561 aaPredicted RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 ATAD1Q8NBU5 361 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 TTC8Q8TAM2 541 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 TCHPQ9BT92 498 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 ASAH2Q9NR71 780 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 RXFP3Q9NSD7 469 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 GTSE1Q9NYZ3 720 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 DNM3Q9UQ16 869 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 SLC27A5Q9Y2P5 690 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
TUBB3-204ENST00000554116 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
TUBB3-204ENST00000554116 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 SPECC1L-ADORA2AF8WAN1 911 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 OBSL1O75147 1896 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 PRAMEF12O95522 483 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 CPB1P15086 417 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 GUCY2CP25092 1073 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 CTHP32929 405 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 RAD51AP2Q09MP3 1159 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 DMP1Q13316 513 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-204ENST00000554116 SIM2Q14190 667 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-204ENST00000554116 NOLC1Q14978 699 aaKnown RBP eCLIP12.58□□□□□ -0.4
TUBB3-204ENST00000554116 CSRP2Q16527 193 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 ARSHQ5FYA8 562 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 HYIQ5T013 277 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 IQCEQ6IPM2 695 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 PRR23CQ6ZRP0 262 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 APBB1IPQ7Z5R6 666 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-204ENST00000554116 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 APPL2Q8NEU8 664 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 C17orf75Q9HAS0 396 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 IL21Q9HBE4 155 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 ANGPTL2Q9UKU9 493 aa12.58□□□□□ -0.4
TUBB3-204ENST00000554116 MTMR11A4FU01 709 aa12.57□□□□□ -0.4
TUBB3-204ENST00000554116 OTOL1A6NHN0 477 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-204ENST00000554116 LACTBL1A8MY62 500 aa12.57□□□□□ -0.4
TUBB3-204ENST00000554116 CDR1P51861 262 aa12.57□□□□□ -0.4
TUBB3-204ENST00000554116 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
TUBB3-204ENST00000554116 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
TUBB3-204ENST00000554116 TNK2Q07912 1038 aa12.57□□□□□ -0.4
TUBB3-204ENST00000554116 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
TUBB3-204ENST00000554116 RILPL1Q5EBL4 403 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms