RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FLYWCH1Q4VC44 716 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 CEP78Q5JTW2 689 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 UTP14CQ5TAP6 766 aaKnown RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 SLC18B1Q6NT16 456 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 SAMD14Q8IZD0 417 aaPredicted RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 CAMKK1Q8N5S9 505 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 NSUN7Q8NE18 718 aaKnown RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 SNX19Q92543 992 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 SH2D3AQ9BRG2 576 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 POLR3GLQ9BT43 218 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 C11orf54Q9H0W9 315 aaPredicted RBP3.25□□□□□ -1.89
SRP54-204ENST00000553923 IFT22Q9H7X7 185 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 NRIP3Q9NQ35 241 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 ANLNQ9NQW6 1124 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 SERTAD4Q9NUC0 356 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 CDYLQ9Y232 598 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 PCDHGA2Q9Y5H1 932 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 CACNA1IQ9P0X4 2223 aa3.25□□□□□ -1.89
SRP54-204ENST00000553923 CCDC195A0A1B0GUA6 201 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 ZNF213O14771 459 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 ADAMTS3O15072 1205 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 INSIG1O15503 277 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 TTLL1O95922 423 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 CD1AP06126 327 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 RHOP08100 348 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 JUPP14923 745 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 TKTP29401 623 aaKnown RBP3.24□□□□□ -1.89
SRP54-204ENST00000553923 GPR3P46089 330 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 MTNR1BP49286 362 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 CCT8P50990 548 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 SRSF2Q01130 221 aaKnown RBP3.24□□□□□ -1.89
SRP54-204ENST00000553923 LAMB3Q13751 1172 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 CCDC144BQ3MJ40 725 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 KRT73Q86Y46 540 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 ZDHHC17Q8IUH5 632 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 CFAP52Q8N1V2 620 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 IL17RDQ8NFM7 739 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 DRC1Q96MC2 740 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 TMEM79Q9BSE2 394 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 CHMP4AQ9BY43 222 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 MANSC1Q9H8J5 431 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 ELOVL5Q9NYP7 299 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 DKK3Q9UBP4 350 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 MAPRE3Q9UPY8 281 aa3.24□□□□□ -1.89
SRP54-204ENST00000553923 FNDC1Q4ZHG4 1894 aaPredicted RBP3.24□□□□□ -1.89
SRP54-204ENST00000553923 FAM171A2A8MVW0 826 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 H3BNC9 293 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 GRM6O15303 877 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 PDE8AO60658 829 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 TUBB4AP04350 444 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 NR2F6P10588 404 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 POU6F2P78424 691 aaPredicted RBP3.23□□□□□ -1.89
SRP54-204ENST00000553923 ZNF844Q08AG5 666 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 SLC2A7Q6PXP3 512 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 KIAA0907Q7Z7F0 614 aaPredicted RBP3.23□□□□□ -1.89
SRP54-204ENST00000553923 RNF180Q86T96 592 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 B3GALNT2Q8NCR0 500 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 POC1BQ8TC44 478 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 USP7Q93009 1102 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 SLC45A2Q9UMX9 530 aa3.23□□□□□ -1.89
SRP54-204ENST00000553923 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.23□□□□□ -1.89
SRP54-204ENST00000553923 SPATA31A3Q5VYP0 1347 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 E9PLN8 166 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 SLC43A1O75387 559 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 JTBO76095 146 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 CYP2D6P10635 497 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 LPOP22079 712 aaPredicted RBP3.22□□□□□ -1.89
SRP54-204ENST00000553923 CCKARP32238 428 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 ZNF134P52741 427 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 SCAND1P57086 179 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 LINC00205P59089 165 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 CREMQ03060 361 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 TARDBPQ13148 414 aaKnown RBP eCLIP3.22□□□□□ -1.89
SRP54-204ENST00000553923 PABPC1LQ4VXU2 614 aaKnown RBP3.22□□□□□ -1.89
SRP54-204ENST00000553923 CEP85Q6P2H3 762 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 STRA8Q7Z7C7 330 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 FAM9AQ8IZU1 332 aaPredicted RBP3.22□□□□□ -1.89
SRP54-204ENST00000553923 TMIEQ8NEW7 156 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 TTC1Q99614 292 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 VKORC1Q9BQB6 163 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 ALG8Q9BVK2 526 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 AMBRA1Q9C0C7 1298 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 PRSS22Q9GZN4 317 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 EHD3Q9NZN3 535 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 JKAMPQ9P055 326 aa3.22□□□□□ -1.89
SRP54-204ENST00000553923 CYP2D7A0A087X1C5 515 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 PRRT4C9JH25 899 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 PRR23D1E9PI22 279 aaPredicted RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 TOR1BO14657 336 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 PRR23D2P0DMB1 279 aaPredicted RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 MTHFD1P11586 935 aaKnown RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 ZFXP17010 805 aaPredicted RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 WASP42768 502 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 NPTX2P47972 431 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 SLC5A3P53794 718 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 DAZAP2Q15038 168 aaPredicted RBP3.21□□□□□ -1.9
SRP54-204ENST00000553923 ZNF260Q3ZCT1 412 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 PRAMEF17Q5VTA0 474 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 IFI44Q8TCB0 444 aa3.21□□□□□ -1.9
SRP54-204ENST00000553923 FBXO41Q8TF61 875 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms