RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 POLHQ9Y253 713 aa5.25□□□□□ -1.57
SCFD1-210ENST00000553693 MGST3O14880 152 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 SUN1O94901 812 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 CHEK2O96017 543 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 IGLV2-14P01704 120 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 FTH1P19P0C7X4 201 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 MALP21145 153 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 CCDC93Q567U6 631 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 ZNF362Q5T0B9 420 aaPredicted RBP5.24□□□□□ -1.57
SCFD1-210ENST00000553693 KAZNQ674X7 775 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 ARHGEF25Q86VW2 580 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 ADGRG5Q8IZF4 528 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 SLC17A8Q8NDX2 589 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 UROC1Q96N76 676 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 BRD9Q9H8M2 597 aa5.24□□□□□ -1.57
SCFD1-210ENST00000553693 COL11A2P13942 1736 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 F2RL2O00254 374 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 PROP1O75360 226 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 RECQLP46063 649 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 FXR1P51114 621 aaKnown RBP eCLIP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 KRTAP10-11P60412 298 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 NHLH1Q02575 133 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 ITIH3Q06033 890 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 KHDC1Q4VXA5 237 aaKnown RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 AKNAD1Q5T1N1 836 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 B3GALNT2Q8NCR0 500 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 C3orf20Q8ND61 904 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 TOR1AIP2Q8NFQ8 470 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 SLC30A5Q8TAD4 765 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 LPIN2Q92539 896 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 TRIB1Q96RU8 372 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 DMRTA2Q96SC8 542 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 SMAD5Q99717 465 aaKnown RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 VRK1Q99986 396 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-210ENST00000553693 SIK2Q9H0K1 926 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 SLC45A2Q9UMX9 530 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 COL4A3BPQ9Y5P4 624 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 TNKSO95271 1327 aa5.23□□□□□ -1.57
SCFD1-210ENST00000553693 POLRMTO00411 1230 aaKnown RBP5.22□□□□□ -1.57
SCFD1-210ENST00000553693 SLC16A6O15403 523 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 SNUPNO95149 360 aaKnown RBP5.22□□□□□ -1.57
SCFD1-210ENST00000553693 ZNF37AP17032 561 aaPredicted RBP5.22□□□□□ -1.57
SCFD1-210ENST00000553693 GATA3P23771 443 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 GRIA3P42263 894 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 NPTX2P47972 431 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 MAPK10P53779 464 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 NXPH1P58417 271 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 MC2RQ01718 297 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 SNAPC2Q13487 334 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 PTPRRQ15256 657 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 PEG10Q86TG7 708 aaKnown RBP5.22□□□□□ -1.57
SCFD1-210ENST00000553693 MYCBPAPQ8TBZ2 947 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 ASPSCR1Q9BZE9 553 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 KLK15Q9H2R5 256 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.22□□□□□ -1.57
SCFD1-210ENST00000553693 ENTPD2Q9Y5L3 495 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 SPATA31A3Q5VYP0 1347 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 WASHC2CQ9Y4E1 1318 aa5.22□□□□□ -1.57
SCFD1-210ENST00000553693 A0A0B4J269 797 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 ZNF785A8K8V0 405 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 NT5C1B-RDH14C9J2C7 533 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 SOAT2O75908 522 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 GJB1P08034 283 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 PPP3CBP16298 524 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 GPD1P21695 349 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 PIK3CGP48736 1102 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 SOX10P56693 466 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 EVA1CP58658 441 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 DSC2Q02487 901 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 TUBB3Q13509 450 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 ODF1Q14990 250 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 COLEC12Q5KU26 742 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 TMPRSS9Q7Z410 1059 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 GLCCI1Q86VQ1 547 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 NSUN7Q8NE18 718 aaKnown RBP5.21□□□□□ -1.58
SCFD1-210ENST00000553693 TFAP2BQ92481 460 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 RGMAQ96B86 450 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 TIMP4Q99727 224 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 CNPPD1Q9BV87 410 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 WDCPQ9H6R7 721 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 PCDH12Q9NPG4 1184 aa5.21□□□□□ -1.58
SCFD1-210ENST00000553693 VSX1Q9NZR4 365 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-210ENST00000553693 FEZ2Q9UHY8 353 aaPredicted RBP5.21□□□□□ -1.58
SCFD1-210ENST00000553693 E9PLN8 166 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 C1QL1O75973 258 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ZRANB2O95218 330 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCFD1-210ENST00000553693 MATN4O95460 622 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 RARBP10826 455 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 CDK4P11802 303 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ZNF135P52742 658 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-210ENST00000553693 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-210ENST00000553693 PSMC1P62191 440 aaKnown RBP5.2□□□□□ -1.58
SCFD1-210ENST00000553693 TMEM240Q5SV17 173 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ZKSCAN2Q63HK3 967 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 POC1BQ8TC44 478 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 ZNF384Q8TF68 577 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 SARAFQ96BY9 339 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 VKORC1Q9BQB6 163 aa5.2□□□□□ -1.58
SCFD1-210ENST00000553693 GPR35Q9HC97 309 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms