RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 VRTNQ9H8Y1 702 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 VIPAS39Q9H9C1 493 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 RPF1Q9H9Y2 349 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 PDE11AQ9HCR9 933 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 SEPT11Q9NVA2 429 aaKnown RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 FAM53CQ9NYF3 392 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 STXBP5LQ9Y2K9 1186 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 DERAQ9Y315 318 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 PCDHB11Q9Y5F2 797 aa7.82□□□□□ -1.16
ATXN3-221ENST00000553498 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-221ENST00000553498 SMIM35A0A1B0GVV1 85 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CCDC66A2RUB6 948 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 H3BM21 787 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 PGRMC1O00264 195 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 KCNK3O14649 394 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 MAN1A2O60476 641 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 SRGAP2O75044 1071 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 SGPL1O95470 568 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 VNN1O95497 513 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 STAU1O95793 577 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 TMEM191BP0C7N4 346 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 GNAT1P11488 350 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 KRT5P13647 590 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 P4HA1P13674 534 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CHRNB2P17787 502 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ACO1P21399 889 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 AXLP30530 894 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 SLC1A1P43005 524 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NOP14P78316 857 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 FMO1Q01740 532 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CENPCQ03188 943 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 DRP2Q13474 957 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 TRPC3Q13507 836 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 TAF1CQ15572 869 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 GRIK4Q16099 956 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CLEC16AQ2KHT3 1053 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 DCAF4L1Q3SXM0 396 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF568Q3ZCX4 644 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 LIN9Q5TKA1 542 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NFRKBQ6P4R8 1299 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 HDXQ7Z353 690 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NOP9Q86U38 636 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 SAPCD2Q86UD0 394 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NT5DC3Q86UY8 548 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 SLC47A2Q86VL8 602 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 USP38Q8NB14 1042 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NOA1Q8NC60 698 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 COG1Q8WTW3 980 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 DDX1Q92499 740 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ZBTB45Q96K62 511 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CAPZA3Q96KX2 299 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NLRP4Q96MN2 994 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 RUNDC3BQ96NL0 473 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 APBA2Q99767 749 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ADPGKQ9BRR6 497 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 NIF3L1Q9GZT8 377 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 THAP2Q9H0W7 228 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 WNT8AQ9H1J5 351 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CDT1Q9H211 546 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ALG2Q9H553 416 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 PLEKHA5Q9HAU0 1116 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CYP3A43Q9HB55 503 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 IFT122Q9HBG6 1241 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 MRPL47Q9HD33 250 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 TOPORSQ9NS56 1045 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 CTTNBP2NLQ9P2B4 639 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 ZHX1Q9UKY1 873 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 GNEQ9Y223 722 aaKnown RBP7.81□□□□□ -1.16
ATXN3-221ENST00000553498 C2CD2Q9Y426 696 aa7.81□□□□□ -1.16
ATXN3-221ENST00000553498 GOLGA6L10A0A0M3HER8 536 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 A0A1B0GUA9 196 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 MBLAC1A4D2B0 266 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 TMCO5BA8MYB1 307 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 PDE2AO00408 941 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 BUB1BO60566 1050 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 ERLIN2O94905 339 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 FTCDO95954 541 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 IGHA2P01877 340 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 CYP1A1P04798 512 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 PNMA6AP0CW24 399 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 UNGP13051 313 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 NSFP46459 744 aaKnown RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 CLCN3P51790 818 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 ZNF132P52740 706 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 TAP1Q03518 808 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 LONRF2Q1L5Z9 754 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 C8orf74Q6P047 294 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 MAATS1Q7Z4T9 603 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 IFT20Q8IY31 132 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 KRT222Q8N1A0 295 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 NME8Q8N427 588 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 UBR7Q8N806 425 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 NPLOC4Q8TAT6 608 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 RNF217Q8TC41 542 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 SLC20A1Q8WUM9 679 aa7.8□□□□□ -1.16
ATXN3-221ENST00000553498 GCOM2Q9BZD3 368 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-221ENST00000553498 DNAI2Q9GZS0 605 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms