RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CLDN23Q96B33 292 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 CCDC51Q96ER9 411 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 BORCS6Q96GS4 357 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SHDQ96IW2 340 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 AGXT2Q9BYV1 514 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 BCO2Q9BYV7 579 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PIDD1Q9HB75 910 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 XPNPEP1Q9NQW7 623 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SPATA6Q9NWH7 488 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-219ENST00000553488 NCDNQ9UBB6 729 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SEPT3Q9UH03 358 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 ADAM28Q9UKQ2 775 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 CDH7Q9ULB5 785 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 SLC6A14Q9UN76 642 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 USP20Q9Y2K6 914 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 IGF2RP11717 2491 aa8.1□□□□□ -1.11
ATXN3-219ENST00000553488 M0R082 166 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 ADRB1P08588 477 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 POU2F2P09086 479 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 SRGAP2CP0DJJ0 459 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 NID1P14543 1247 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 AXLP30530 894 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 HOXA9P31269 272 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 QARSP47897 775 aaKnown RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 PTENP60484 403 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CREMQ03060 361 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 LMNB2Q03252 620 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 MBTD1Q05BQ5 628 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 GRIK3Q13003 919 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 FZD5Q13467 585 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 KRT32Q14532 448 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 UBXN2BQ14CS0 331 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 PCBP1Q15365 356 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 NOTUMQ6P988 496 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 PRSS55Q6UWB4 352 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 RSPO2Q6UXX9 243 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 Q6ZUG5 572 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 C8orf86Q6ZUL3 223 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 MTSS1LQ765P7 747 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 GRASPQ7Z6J2 395 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 FBXL16Q8N461 479 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 RNF149Q8NC42 400 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 FGF13Q92913 245 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 KCNB2Q92953 911 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CPB2Q96IY4 423 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CEP170P1Q96L14 293 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 ZNF587Q96SQ5 575 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CLSTN3Q9BQT9 956 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 PAAF1Q9BRP4 392 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 SLC26A6Q9BXS9 759 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CSRNP2Q9H175 543 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 KCNMB3Q9NPA1 279 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 SH3GLB2Q9NR46 395 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 ZSCAN32Q9NX65 697 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 STIM2Q9P246 746 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CACNG4Q9UBN1 327 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 NAGPAQ9UK23 515 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 NAP1L2Q9ULW6 460 aaPredicted RBP8.09□□□□□ -1.11
ATXN3-219ENST00000553488 PCDHA4Q9UN74 947 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 GIT1Q9Y2X7 761 aa8.09□□□□□ -1.11
ATXN3-219ENST00000553488 CITO14578 2027 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 SF3B1O75533 1304 aaKnown RBP eCLIP8.08□□□□□ -1.124e-12■■■■■ 275.7
ATXN3-219ENST00000553488 EML5Q05BV3 1969 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 FAM170BA6NMN3 283 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 PRR5-ARHGAP8B1AHC4 643 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ZBTB39O15060 712 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ADAM12O43184 909 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ERLIN2O94905 339 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 KIF4AO95239 1232 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 IGHA1P01876 353 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 C8AP07357 584 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 HNRNPA1P09651 372 aaKnown RBP eCLIP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ARF4P18085 180 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 CD72P21854 359 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 SDHBP21912 280 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 SCNN1AP37088 669 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 EVCP57679 992 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ARHGAP8P85298 464 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 CSTF1Q05048 431 aaKnown RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 SPIRE1Q08AE8 756 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 CAPSQ13938 189 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 SLC44A4Q53GD3 710 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 TSSK4Q6SA08 328 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 C4orf19Q8IY42 314 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ITFG1Q8TB96 612 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 LNX1Q8TBB1 728 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-219ENST00000553488 ASAP3Q8TDY4 903 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 PIK3R5Q8WYR1 880 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 RABGGTAQ92696 567 aa8.08□□□□□ -1.12
ATXN3-219ENST00000553488 KXD1Q9BQD3 176 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms