RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TRAPPC11Q7Z392 1133 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 ADSSL1Q8N142 457 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 CSGALNACT2Q8N6G5 542 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 C12orf76Q8N812 135 aaPredicted RBP19.89■□□□□ 0.77
CPSF2-202ENST00000553427 ZNF461Q8TAF7 563 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 SPATA18Q8TC71 538 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 PLEKHO2Q8TD55 490 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 TMC2Q8TDI7 906 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 CCDC127Q96BQ5 260 aa19.89■□□□□ 0.77
CPSF2-202ENST00000553427 PHF7Q9BWX1 381 aaPredicted RBP19.89■□□□□ 0.77
CPSF2-202ENST00000553427 C5orf42Q9H799 3197 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 SPDYE4A6NLX3 237 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 CYB561D2O14569 222 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 HNRNPA1P09651 372 aaKnown RBP eCLIP19.88■□□□□ 0.77
CPSF2-202ENST00000553427 CASP4P49662 377 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 MCCD1P59942 119 aaPredicted RBP19.88■□□□□ 0.77
CPSF2-202ENST00000553427 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 ATAT1Q5SQI0 421 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 FOXR2Q6PJQ5 311 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 TMC5Q6UXY8 1006 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 ZC3H3Q8IXZ2 948 aaKnown RBP19.88■□□□□ 0.77
CPSF2-202ENST00000553427 FAM84AQ96KN4 292 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 MKNK1Q9BUB5 465 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 APOL5Q9BWW9 433 aa19.88■□□□□ 0.77
CPSF2-202ENST00000553427 TCF20Q9UGU0 1960 aaKnown RBP19.88■□□□□ 0.77
CPSF2-202ENST00000553427 MTCL1Q9Y4B5 1905 aaKnown RBP19.88■□□□□ 0.77
CPSF2-202ENST00000553427 WDR27A2RRH5 827 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 STAU1O95793 577 aaKnown RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 SPATA31D3P0C874 917 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 ATF2P15336 505 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 LRRC63Q05C16 580 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 MYO1EQ12965 1108 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 STIM1Q13586 685 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 MORC3Q14149 939 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 CEP135Q66GS9 1140 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 SPATA31D4Q6ZUB0 917 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 CCDC149Q6ZUS6 474 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 INTS8Q75QN2 995 aaKnown RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 TRIML1Q8N9V2 468 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 ZNF707Q96C28 371 aaPredicted RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 NECAB3Q96P71 396 aaPredicted RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 PRKD2Q9BZL6 878 aa19.87■□□□□ 0.77
CPSF2-202ENST00000553427 AFF4Q9UHB7 1163 aaKnown RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 TIMM13Q9Y5L4 95 aaPredicted RBP19.87■□□□□ 0.77
CPSF2-202ENST00000553427 CCDC195A0A1B0GUA6 201 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 LRRIQ3A6PVS8 624 aaPredicted RBP19.86■□□□□ 0.77
CPSF2-202ENST00000553427 PSMA7O14818 248 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 IKBKBO14920 756 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 RFPL2O75678 378 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 AKAP3O75969 853 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 C8AP07357 584 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 KRT19P08727 400 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 ADAM9Q13443 819 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 LIMS2Q7Z4I7 341 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 TCEAL8Q8IYN2 117 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 TMEM86AQ8N2M4 240 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 TOP6BLQ8N6T0 577 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 ZNF516Q92618 1163 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 DHTKD1Q96HY7 919 aaPredicted RBP19.86■□□□□ 0.77
CPSF2-202ENST00000553427 TSG101Q99816 390 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 POMKQ9H5K3 350 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 LMBRD1Q9NUN5 540 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 KIAA1468Q9P260 1216 aa19.86■□□□□ 0.77
CPSF2-202ENST00000553427 LOC730098B7Z3J9 87 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 TULP1O00294 542 aaPredicted RBP19.85■□□□□ 0.77
CPSF2-202ENST00000553427 BMP6P22004 513 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 PSMC2P35998 433 aaKnown RBP19.85■□□□□ 0.77
CPSF2-202ENST00000553427 BFSP1Q12934 665 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 GPR17Q13304 367 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 PPM1LQ5SGD2 360 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 WSCD1Q658N2 575 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 SCARA3Q6AZY7 606 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 DPH6Q7L8W6 267 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 FAM186BQ8IYM0 893 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 GJD3Q8N144 294 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 PDCL2Q8N4E4 241 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 SLC7A14Q8TBB6 771 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 HPDLQ96IR7 371 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 CLSTN2Q9H4D0 955 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 VRTNQ9H8Y1 702 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 CDH22Q9UJ99 828 aa19.85■□□□□ 0.77
CPSF2-202ENST00000553427 DENND4AQ7Z401 1863 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 DLL1O00548 723 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 CETN3O15182 167 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 SLC16A3O15427 465 aaKnown RBP19.84■□□□□ 0.77
CPSF2-202ENST00000553427 HUS1O60921 280 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 CPB1P15086 417 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 CCNE1P24864 410 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 ATICP31939 592 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 FKBP3Q00688 224 aaKnown RBP19.84■□□□□ 0.77
CPSF2-202ENST00000553427 ZACNQ401N2 412 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 TDRD10Q5VZ19 366 aaKnown RBP19.84■□□□□ 0.77
CPSF2-202ENST00000553427 OR10T2Q8NGX3 314 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 SMG7Q92540 1137 aaKnown RBP19.84■□□□□ 0.77
CPSF2-202ENST00000553427 RTP3Q9BQQ7 232 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 WDR6Q9NNW5 1121 aaKnown RBP19.84■□□□□ 0.77
CPSF2-202ENST00000553427 L1RE1Q9UN81 338 aa19.84■□□□□ 0.77
CPSF2-202ENST00000553427 USTQ9Y2C2 406 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms