RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-231ENST00000553055 TK1P04183 234 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 MMEP08473 750 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 KIF5BP33176 963 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 ARL3P36405 182 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 TMF1P82094 1093 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 MAP3K12Q12852 859 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 CHAF1BQ13112 559 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 CUL4BQ13620 913 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 ACVR2BQ13705 512 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 TARBP2Q15633 366 aaKnown RBP8.09□□□□□ -1.11
PFKM-231ENST00000553055 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.11
PFKM-231ENST00000553055 ZNF783Q6ZMS7 281 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 SLCO4C1Q6ZQN7 724 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 GADL1Q6ZQY3 521 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 SV2AQ7L0J3 742 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 KANSL1Q7Z3B3 1105 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 SDCCAG8Q86SQ7 713 aaPredicted RBP8.09□□□□□ -1.11
PFKM-231ENST00000553055 PRPF39Q86UA1 669 aaKnown RBP8.09□□□□□ -1.11
PFKM-231ENST00000553055 RSPH3Q86UC2 560 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 CDYL2Q8N8U2 506 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 MGARPQ8TDB4 240 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 TBC1D22AQ8WUA7 517 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 GAB3Q8WWW8 586 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 ASB15Q8WXK1 588 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 DDX17Q92841 729 aaKnown RBP8.09□□□□□ -1.11
PFKM-231ENST00000553055 TRIM54Q9BYV2 358 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 EDEM3Q9BZQ6 932 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 SIL1Q9H173 461 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 TSPY26PQ9H489 355 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 MANSC1Q9H8J5 431 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 MLXIPQ9HAP2 919 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 INCENPQ9NQS7 918 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.09□□□□□ -1.11
PFKM-231ENST00000553055 RGL1Q9NZL6 768 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 CALCOCO1Q9P1Z2 691 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 EPS15L1Q9UBC2 864 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 ZNF212Q9UDV6 495 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 USP18Q9UMW8 372 aa8.09□□□□□ -1.11
PFKM-231ENST00000553055 hCG_1807616A0A1W2PRN6 198 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 FAM90A27PA6NNH2 459 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 DEAF1O75398 565 aaPredicted RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 ENDOD1O94919 500 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 WISP1O95388 367 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 A1BGP04217 495 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 KRT1P04264 644 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 CLTBP09497 229 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 JUPP14923 745 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 STMN1P16949 149 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 RXRAP19793 462 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 IL11P20809 199 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 CARSP49589 748 aaKnown RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 BPIFB3P59826 476 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 AP2B1P63010 937 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 SLC6A3Q01959 620 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 AOC3Q16853 763 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 SLC9C2Q5TAH2 1124 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 RPUSD3Q6P087 351 aaKnown RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 CCDC91Q7Z6B0 441 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 GLB1L2Q8IW92 636 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 GLIS1Q8NBF1 620 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 NLGN2Q8NFZ4 835 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 OR6Y1Q8NGX8 325 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 CREB3L4Q8TEY5 395 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 FOXRED1Q96CU9 486 aaPredicted RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 FEM1CQ96JP0 617 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 SNX27Q96L92 541 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 TWNKQ96RR1 684 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 FOXB1Q99853 325 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 VRK1Q99986 396 aaPredicted RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 GDF15Q99988 308 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 DDX23Q9BUQ8 820 aaKnown RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
PFKM-231ENST00000553055 NOD2Q9HC29 1040 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 PI4KBQ9UBF8 816 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 RASAL2Q9UJF2 1139 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 CNPY2Q9Y2B0 182 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 PCDHB6Q9Y5E3 794 aa8.08□□□□□ -1.12
PFKM-231ENST00000553055 CDC42BPAQ5VT25 1732 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 FMN1Q68DA7 1419 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 FCHO1O14526 889 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 FYB1O15117 783 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 FKTNO75072 461 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 HSPA1AP0DMV8 641 aaKnown RBP8.07□□□□□ -1.12
PFKM-231ENST00000553055 HSPA1BP0DMV9 641 aaKnown RBP8.07□□□□□ -1.12
PFKM-231ENST00000553055 SCG2P13521 617 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 MSH2P43246 934 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 SEC24CP53992 1094 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 PRKAA2P54646 552 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 NRG3P56975 720 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.07□□□□□ -1.12
PFKM-231ENST00000553055 PPP3CAQ08209 521 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 NAA16Q6N069 864 aaPredicted RBP8.07□□□□□ -1.12
PFKM-231ENST00000553055 UNQ6494/PRO21346Q6UXR6 183 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 RNF111Q6ZNA4 994 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 MFSD6Q6ZSS7 791 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 C22orf34Q6ZV56 151 aa8.07□□□□□ -1.12
PFKM-231ENST00000553055 R3HCC1LQ7Z5L2 792 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms