RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 HCFC2Q9Y5Z7 792 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 TRIP11Q15643 1979 aa11.04□□□□□ -0.64
TRAFD1-208ENST00000552890 HIDE1A8MVS5 230 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 BIN1O00499 593 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 B4GALT3O60512 393 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 AKAP3O75969 853 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 CLSTN1O94985 981 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 FGF19O95750 216 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 KCNA5P22460 613 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 IRS1P35568 1242 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 CLCN4P51793 760 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 SPAG1Q07617 926 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 NCOA4Q13772 614 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 KLHL40Q2TBA0 621 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ZACNQ401N2 412 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 TJAP1Q5JTD0 557 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 TCERG1LQ5VWI1 586 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ANKRD40Q6AI12 368 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 KLHL10Q6JEL2 608 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ANKRD54Q6NXT1 300 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 HASPINQ8TF76 798 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 TNIP3Q96KP6 325 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ACBD6Q9BR61 282 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 PAAF1Q9BRP4 392 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ADAM7Q9H2U9 754 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 SNX25Q9H3E2 840 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 AFF4Q9UHB7 1163 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ZMYM5Q9UJ78 669 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 NR2E1Q9Y466 385 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 ASB3Q9Y575 518 aa11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 COL4A4P53420 1690 aaPredicted RBP11.03□□□□□ -0.64
TRAFD1-208ENST00000552890 PDCD11Q14690 1871 aaKnown RBP11.02□□□□□ -0.64
TRAFD1-208ENST00000552890 PPP1R3GB7ZBB8 358 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 PRRG1O14668 218 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 TACC1O75410 805 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 CPB1P15086 417 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ATF2P15336 505 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 TKTP29401 623 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 OR1D2P34982 312 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 BRCC3P46736 316 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 MXI1P50539 228 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 MARSP56192 900 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 GPR17Q13304 367 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 KCNC3Q14003 757 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 STX1AQ16623 288 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ZNF699Q32M78 642 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 RTP2Q5QGT7 225 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 TTI2Q6NXR4 508 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 C4orf50Q6ZRC1 276 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 RBM43Q6ZSC3 357 aaKnown RBP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 TCEAL8Q8IYN2 117 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 SMYD4Q8IYR2 804 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 SMRP1Q8NCR6 262 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 KREMEN2Q8NCW0 462 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 FBXL13Q8NEE6 735 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 VN1R2Q8NFZ6 395 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 SLC22A17Q8WUG5 538 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ASB2Q96Q27 587 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 CLSTN3Q9BQT9 956 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 VN1R3Q9BXE9 311 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 SNX9Q9Y5X1 595 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ZFP37Q9Y6Q3 630 aaPredicted RBP11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 ATP8B3O60423 1300 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.65
TRAFD1-208ENST00000552890 BRWD1Q9NSI6 2320 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PER2O15055 1255 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ABLIM3O94929 683 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PAPLNO95428 1278 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 LRG1P02750 347 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PIK3CAP42336 1068 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ALDH1A3P47895 512 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 TPM4P67936 248 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 VEPH1Q14D04 833 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 WDR72Q3MJ13 1102 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 IQCEQ6IPM2 695 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 LILRA6Q6PI73 481 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 SV2AQ7L0J3 742 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 TAS1R1Q7RTX1 841 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ITIH5Q86UX2 942 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ADGRF2Q8IZF7 708 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ACSF2Q96CM8 615 aaPredicted RBP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 MMS19Q96T76 1030 aa11.01□□□□□ -0.65
TRAFD1-208ENST00000552890 ANP32EQ9BTT0 268 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms