RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 KIAA1549LQ6ZVL6 1849 aa12.48□□□□□ -0.41
SUPT16H-202ENST00000552829 ZNF638Q14966 1978 aaKnown RBP12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 A0A087WWV3 80 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 A0A1W2PRU2 124 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 FAM221BA6H8Z2 402 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 TRDMT1O14717 391 aaKnown RBP12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 ATG13O75143 517 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 DEXIO95424 95 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 MAPK6Q16659 721 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 STXBP5Q5T5C0 1151 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 RNF19BQ6ZMZ0 732 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 GAREM2Q75VX8 874 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 ZBTB8OSQ8IWT0 167 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 SLFN12Q8IYM2 578 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 TRIM22Q8IYM9 498 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 FAM200AQ8TCP9 573 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 PIGOQ8TEQ8 1089 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 SUSD3Q96L08 255 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 ZMAT2Q96NC0 199 aaKnown RBP12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 SLITRK6Q9H5Y7 841 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
SUPT16H-202ENST00000552829 APC2O95996 2303 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 PODXLO00592 558 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 DCLK1O15075 740 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 CCNT1O60563 726 aaKnown RBP12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 RHOBTB1O94844 696 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 RPS6KB1P23443 525 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 CREB5Q02930 508 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 ELF2Q15723 593 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 CTXN3Q4LDR2 81 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 MCPH1Q8NEM0 835 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 NAP1L4Q99733 375 aaKnown RBP12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 FAM83CQ9BQN1 747 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 CRISPLD1Q9H336 500 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 TMEM9BQ9NQ34 198 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 EBF1Q9UH73 591 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 KCNJ14Q9UNX9 436 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 YIPF1Q9Y548 306 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 BPTFQ12830 3046 aa12.46□□□□□ -0.41
SUPT16H-202ENST00000552829 CCDC194A0A1B0GVG4 234 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 HYAL3O43820 417 aaPredicted RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 PRAMEF12O95522 483 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 KCNE1P15382 129 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 RPL9P32969 192 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 KARSQ15046 597 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 EARS2Q5JPH6 523 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 HAUS6Q7Z4H7 955 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 BPIFB1Q8TDL5 484 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 JAKMIP1Q96N16 626 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 HPS4Q9NQG7 708 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 SLC38A7Q9NVC3 462 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 KLK13Q9UKR3 277 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 GPSM3Q9Y4H4 160 aa12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 TNRC6BQ9UPQ9 1833 aaKnown RBP12.45□□□□□ -0.42
SUPT16H-202ENST00000552829 MAST4O15021 2626 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 OTOL1A6NHN0 477 aaPredicted RBP12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 DPYSL4O14531 572 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 KHNYNO15037 678 aaKnown RBP12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 MARCH6O60337 910 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 OAZ2O95190 189 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 EGFP01133 1207 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 SPATA31C1P0DKV0 1188 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 GRM5P41594 1212 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 PMS2CLQ68D20 193 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 PIP4P1Q86T03 277 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 PROSER1Q86XN7 944 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 CEP120Q8N960 986 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 OXER1Q8TDS5 423 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 DDX12PQ92771 950 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 HHIPQ96QV1 700 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 FBRSL1Q9HCM7 1045 aaKnown RBP12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 PCDHA12Q9UN75 941 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 SNX14Q9Y5W7 946 aa12.44□□□□□ -0.42
SUPT16H-202ENST00000552829 PLXNB3Q9ULL4 1909 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 PATE3B3GLJ2 98 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 RNF40O75150 1001 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 REC8O95072 547 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 ATP2B1P20020 1258 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 NAMPTP43490 491 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 MCM2P49736 904 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 EPHB3P54753 998 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 IRX4P78413 519 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 GRSF1Q12849 480 aaKnown RBP eCLIP12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 DUSP4Q13115 394 aa12.43□□□□□ -0.42
SUPT16H-202ENST00000552829 PLD1Q13393 1074 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms