RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	WHAMMP3	Q1A5X7	153 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	DNAJC5G	Q8N7S2	189 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	LRRC57	Q8N9N7	239 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	SLC35G2	Q8TBE7	412 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	ZNF606	Q8WXB4	792 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	TRIM11	Q96F44	468 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	DEFB118	Q96PH6	123 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	PPP1R10	Q96QC0	940 aa	Known RBP	13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	PUF60	Q9UHX1	559 aa	Known RBP	13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	GTF3C4	Q9UKN8	822 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	PCDHGC3	Q9UN70	934 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	SAR1B	Q9Y6B6	198 aa		13.54	□□□□□ -0.24
CACNB3-223	ENST00000552480	CTIF	O43310	598 aa	Known RBP	13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	MTA2	O94776	668 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	LSM8	O95777	96 aa	Known RBP	13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	MYBL1	P10243	752 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	PRLR	P16471	622 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	BRD2	P25440	801 aa	Known RBP	13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	LRPAP1	P30533	357 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	NSF	P46459	744 aa	Known RBP	13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	RAD23B	P54727	409 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	CDH8	P55286	799 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	NOMO3	P69849	1222 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	MEI1	Q5TIA1	1274 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	SYCE1	Q8N0S2	351 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	MNS1	Q8NEH6	495 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	WHAMM	Q8TF30	809 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	ZNF653	Q96CK0	615 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	RPS6KC1	Q96S38	1066 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	RNF208	Q9H0X6	261 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	SLC38A7	Q9NVC3	462 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	SNX12	Q9UMY4	172 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480	HYOU1	Q9Y4L1	999 aa		13.53	□□□□□ -0.24
CACNB3-223	ENST00000552480		A0A0U1RQF3	1178 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MED7	O43513	233 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	FTCD	O95954	541 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	SELP	P16109	830 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MLH1	P40692	756 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	TAF6	P49848	677 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	SOX4	Q06945	474 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	BFSP2	Q13515	415 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	SV2C	Q496J9	727 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF394	Q53GI3	561 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	NAA35	Q5VZE5	725 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	AGMO	Q6ZNB7	445 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MON1B	Q7L1V2	547 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	SLFN11	Q7Z7L1	901 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	PHF13	Q86YI8	300 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	FAM126B	Q8IXS8	530 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MCOLN2	Q8IZK6	566 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	CEP112	Q8N8E3	955 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	SLC4A11	Q8NBS3	891 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	CPA5	Q8WXQ8	436 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	PGBD4	Q96DM1	585 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	CYFIP2	Q96F07	1278 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	TMEM176A	Q96HP8	235 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MMS19	Q96T76	1030 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	ADAM2	Q99965	735 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZSWIM1	Q9BR11	485 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	CARD6	Q9BX69	1037 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	TLR10	Q9BXR5	811 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZNF518B	Q9C0D4	1074 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	ELOVL4	Q9GZR5	314 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	OSGEP	Q9NPF4	335 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	UBN1	Q9NPG3	1134 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	AVEN	Q9NQS1	362 aa	Predicted RBP	13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	RNF19A	Q9NV58	838 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	CTTNBP2NL	Q9P2B4	639 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	UVRAG	Q9P2Y5	699 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	TRIP11	Q15643	1979 aa		13.52	□□□□□ -0.25
CACNB3-223	ENST00000552480	MEIS3P2	A8K0S8	358 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	NCK2	O43639	380 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	CFH	P08603	1231 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	VDR	P11473	427 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	CD19	P15391	556 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	TCP1	P17987	556 aa	Known RBP	13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	CDH5	P33151	784 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	C1QBP	Q07021	282 aa	Known RBP	13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	MBTPS1	Q14703	1052 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	LIN9	Q5TKA1	542 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	C11orf63	Q6NUN7	778 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	LRRC8D	Q7L1W4	858 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	PASD1	Q8IV76	773 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	TMEM35B	Q8NCS4	154 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	TFAP2B	Q92481	460 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	LPP	Q93052	612 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	VCPIP1	Q96JH7	1222 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	ZFP42	Q96MM3	310 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	TWNK	Q96RR1	684 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	GAD1	Q99259	594 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	RSAD1	Q9HA92	442 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	GOLGA2P5	Q9HBQ8	144 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	GDAP2	Q9NXN4	497 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	CNOT8	Q9UFF9	292 aa	Known RBP	13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	HMGXB4	Q9UGU5	601 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	KIAA1257	Q9ULG3	409 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	COG5	Q9UP83	839 aa		13.51	□□□□□ -0.25
CACNB3-223	ENST00000552480	SNX9	Q9Y5X1	595 aa		13.51	□□□□□ -0.25

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